RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FNDC4Q9H6D8 234 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF286AQ9HBT8 521 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF331Q9NQX6 463 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF737O75373 536 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 UQCRFS1P47985 274 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 CCR5P51681 352 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 HSD52Q0P140 79 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 FAM71F2Q6NXP2 309 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 CLCF1Q9UBD9 225 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 RHBDD3Q9Y3P4 386 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 TRBV6-7A0A0A0MS04 114 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 A0A1B0GWA3 101 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 C17orf112F2Z3M2 114 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 H0YIZ8 118 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ARPC3O15145 178 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 TOMM40O96008 361 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ADH4P08319 380 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 CD33P20138 364 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 LCN2P80188 198 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-202ENST00000378161 OR2C3Q8N628 320 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 OR8G5Q8NG78 346 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 DNASE2BQ8WZ79 361 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 TSPAN32Q96QS1 320 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 OR2D2Q9H210 308 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 THYN1Q9P016 225 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-202ENST00000378161 CCDC88CQ9P219 2028 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 COL11A1P12107 1806 aaPredicted RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 CST7O76096 145 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM249Q2WGJ8 235 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 CARD17Q5XLA6 110 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 DAZLQ92904 295 aaKnown RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 ELOVL3Q9HB03 270 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 IL23AQ9NPF7 189 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 MRPS28Q9Y2Q9 187 aaKnown RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 IL2RAP01589 272 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 EFNB2P52799 333 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 PLCXD2Q0VAA5 305 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 LRRC10Q5BKY1 277 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 C19orf35Q6ZS72 473 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 MORN4Q8NDC4 146 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 WDR61Q9GZS3 305 aaKnown RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 BANF2Q9H503 90 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 FTH1P19P0C7X4 201 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 HIST1H1CP16403 213 aaKnown RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 HBG1P69891 147 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 HBG2P69892 147 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 SHHQ15465 462 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 SPRED2Q7Z698 418 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 GVQW1Q8N7I0 195 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 OR10V1Q8NGI7 309 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 OR5A1Q8NGJ0 315 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 OR51T1Q8NGJ9 327 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 OR5C1Q8NGR4 320 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 KLHDC7BQ96G42 594 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 LINC00615Q96LM1 132 aaPredicted RBP10.36□□□□□ -0.75
NPHP4-202ENST00000378161 SH3BGRL3Q9H299 93 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 GPR84Q9NQS5 396 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 YAE1D1Q9NRH1 226 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM38BQ9NVV0 291 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 FLRT3Q9NZU0 649 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
NPHP4-202ENST00000378161 PIGBOS1A0A0B4J2F0 54 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 BMPR1BO00238 502 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 PHF19Q5T6S3 580 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SGMS2Q8NHU3 365 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 LIPHQ8WWY8 451 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 VCX2Q9H322 139 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SDF2L1Q9HCN8 221 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 PLEKHJ1Q9NW61 149 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 HIF1ANQ9NWT6 349 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 A0A0J9YY10 115 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 A0A1B0GW64 132 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 FAM24AA6NFZ4 105 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 DEDDO75618 318 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF728P0DKX0 622 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
NPHP4-202ENST00000378161 MLF2Q15773 248 aaPredicted RBP10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SMIM20Q8N5G0 67 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 NMNAT3Q96T66 252 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 PSG11Q9UQ72 335 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 A0A0G2JMM0 328 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 A0A1W2PPB8 328 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 KIR3DP1A8MWS1 328 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 GYPAP02724 150 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 HTR1DP28221 377 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 RND2P52198 227 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
NPHP4-202ENST00000378161 WDR34Q96EX3 536 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SDF2Q99470 211 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 P2RX4Q99571 388 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 LPAR4Q99677 370 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 RSPO3Q9BXY4 272 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms