RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SPRY4Q9C004 299 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 EGLN1Q9GZT9 426 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 RNF122Q9H9V4 155 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 C19orf12Q9NSK7 152 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 RYDENQ9NUL5 291 aaKnown RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 LUZP4Q9P127 313 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FBXO9Q9UK97 447 aaPredicted RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 KPTNQ9Y664 436 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 GPR179Q6PRD1 2367 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 MED12LQ86YW9 2145 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM24AA6NFZ4 105 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 C19orf67A6NJJ6 358 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 CDS2O95674 445 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 CAMLGP49069 296 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
BEST1-201ENST00000378043 LPAL2Q16609 132 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 AKIRIN2Q53H80 203 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 TCEAL6Q6IPX3 200 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 DPPA2Q7Z7J5 298 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 ODF3L1Q8IXM7 274 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 TCEAL3Q969E4 200 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 IP6K3Q96PC2 410 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 ZNF552Q9H707 407 aaPredicted RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 SMCO4Q9NRQ5 59 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 BOKQ9UMX3 212 aaPredicted RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 NBEAQ8NFP9 2946 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 ZNF98A6NK75 572 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 SLC22A20A6NK97 555 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 HSPB6O14558 160 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 SPINK2P20155 84 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 PAX6P26367 422 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 CEACAM21Q3KPI0 293 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 CXorf66Q5JRM2 361 aaPredicted RBP9.36□□□□□ -0.91
BEST1-201ENST00000378043 SHEQ5VZ18 495 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
BEST1-201ENST00000378043 GAPTQ8N292 157 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 OR2C3Q8N628 320 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 COMMD1Q8N668 190 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 TMEM171Q8WVE6 324 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 CALHM2Q9HA72 323 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 TECTAO75443 2155 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 NCOR1O75376 2440 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 PCP4L1A6NKN8 68 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 ZNF732B4DXR9 585 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 K7N7A8 449 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 TUSC2O75896 110 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 TMEM50AO95807 157 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 PPP1CCP36873 323 aaKnown RBP9.36□□□□□ -0.91
BEST1-201ENST00000378043 AKR1D1P51857 326 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 HABP2Q14520 560 aaPredicted RBP9.36□□□□□ -0.91
BEST1-201ENST00000378043 GNMTQ14749 295 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 SRSF7Q16629 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
BEST1-201ENST00000378043 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 SAXO1Q8IYX7 474 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 FAM185AQ8N0U4 392 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 C14orf79Q96F83 325 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 COA4Q9NYJ1 87 aa9.36□□□□□ -0.91
BEST1-201ENST00000378043 A0A1W2PNU3 283 aaPredicted RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 C9orf172C9J069 976 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 PROB1E7EW31 1015 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 SYNGR1O43759 233 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 LILRA1O75019 489 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 PRH1P02810 166 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 TK1P04183 234 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 FOLR2P14207 255 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 NKX2-1P43699 371 aaPredicted RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 RAB5CP51148 216 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 RND3P61587 244 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 CLINT1Q14677 625 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 AWAT1Q58HT5 328 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 NMSQ5H8A3 153 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 SPIN3Q5JUX0 258 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 FAM173AQ9BQD7 235 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 ABHD14AQ9BUJ0 271 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 MAGT1Q9H0U3 335 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 SPACA1Q9HBV2 294 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 BIN3Q9NQY0 253 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 UBE2J1Q9Y385 318 aaPredicted RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 C7orf77A4D0Y5 90 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 ZNF724A8MTY0 619 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 OMGP23515 440 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 MAGEA5P43359 124 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 SRPXP78539 464 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 TGIF1Q15583 401 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 HMGN3Q15651 99 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 PCSK4Q6UW60 755 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 MRPL21Q7Z2W9 205 aaKnown RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 ZDHHC23Q8IYP9 409 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 PLPPR1Q8TBJ4 325 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 HIST1H2BAQ96A08 127 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 APOBEC3DQ96AK3 386 aaPredicted RBP9.35□□□□□ -0.91
BEST1-201ENST00000378043 POM121L2Q96KW2 1035 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 RPS10P5Q9NQ39 176 aa9.35□□□□□ -0.91
BEST1-201ENST00000378043 CCL28Q9NRJ3 127 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms