RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 DCAF16Q9NXF7 216 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 ST3GAL6Q9Y274 331 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 B4DEV8 164 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 CA11O75493 328 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 ZNF25P17030 456 aaPredicted RBP13.72□□□□□ -0.21
CKAP4-201ENST00000378026 IDH3GP51553 393 aaPredicted RBP13.72□□□□□ -0.21
CKAP4-201ENST00000378026 PMS2P11Q13670 270 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 RSPO1Q2MKA7 263 aaPredicted RBP13.72□□□□□ -0.21
CKAP4-201ENST00000378026 DNLZQ5SXM8 178 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 FAM69BQ5VUD6 431 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 MRPL41Q8IXM3 137 aaKnown RBP13.72□□□□□ -0.21
CKAP4-201ENST00000378026 OR8G5Q8NG78 346 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
CKAP4-201ENST00000378026 TMEM222Q9H0R3 208 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 C11orf1Q9H5F2 150 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 SLC7A10Q9NS82 523 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 CEP290O15078 2479 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 HMGB3O15347 200 aaKnown RBP13.72□□□□□ -0.21
CKAP4-201ENST00000378026 GABRG2P18507 467 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 CTHP32929 405 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 PHYHD1Q5SRE7 291 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 Q6ZPA2 131 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 POC1BQ8TC44 478 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 RLN3Q8WXF3 142 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 SNHG12Q9BXW3 62 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 ANGPTL4Q9BY76 406 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 SDF2L1Q9HCN8 221 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 V9GYS6 101 aa13.72□□□□□ -0.21
CKAP4-201ENST00000378026 A0A1W2PNV4 684 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 LINC01565O15544 149 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 DFFBO76075 338 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 OR7C1O76099 320 aaPredicted RBP13.71□□□□□ -0.21
CKAP4-201ENST00000378026 CDS2O95674 445 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 RND2P52198 227 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 RCC1LQ96I51 464 aaKnown RBP13.71□□□□□ -0.21
CKAP4-201ENST00000378026 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.21
CKAP4-201ENST00000378026 KIAA2026Q5HYC2 2103 aa13.71□□□□□ -0.21
CKAP4-201ENST00000378026 HSPB6O14558 160 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 BCL2P10415 239 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 PAX1P15863 534 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 DTYMKP23919 212 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 RTP5Q14D33 572 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 SSX7Q7RTT5 188 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 C16orf82Q7Z2V1 217 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 SELENOHQ8IZQ5 122 aaKnown RBP13.71□□□□□ -0.22
CKAP4-201ENST00000378026 RAB24Q969Q5 203 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 BORCS8Q96FH0 119 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 KLHDC7BQ96G42 594 aa13.71□□□□□ -0.22
CKAP4-201ENST00000378026 IGKV1-12A0A0C4DH73 117 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 A0A1W2PPQ1 181 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 IGKV1D-12P01611 117 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 OPN1MWP04001 364 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 POU2F2P09086 479 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 OPN1MW2P0DN77 364 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 OPN1MW3P0DN78 364 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 TAS2R30P59541 319 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 GJC3Q8NFK1 279 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 OR6X1Q8NH79 312 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 ELOVL1Q9BW60 279 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 METTL7AQ9H8H3 244 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 CDH20Q9HBT6 801 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
CKAP4-201ENST00000378026 A0A1W2PR80 420 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
CKAP4-201ENST00000378026 GAPTQ8N292 157 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 RPUSD4Q96CM3 377 aaKnown RBP13.7□□□□□ -0.22
CKAP4-201ENST00000378026 ATP5SQ99766 215 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 TRBV24-1A0A075B6N3 115 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 IFNA5P01569 189 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 GZMHP20718 246 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 MSR1P21757 451 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
CKAP4-201ENST00000378026 DLX2Q07687 328 aaPredicted RBP13.7□□□□□ -0.22
CKAP4-201ENST00000378026 ZNF818PQ6ZRF7 136 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 SPIN2AQ99865 258 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 SPIN2BQ9BPZ2 258 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 PCGF1Q9BSM1 259 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 PLA2G3Q9NZ20 509 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 FUT9Q9Y231 359 aa13.7□□□□□ -0.22
CKAP4-201ENST00000378026 LRP4O75096 1905 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 SCGB1D1O95968 90 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 MYF5P13349 255 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 PAX5Q02548 391 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 PNRC1Q12796 327 aaPredicted RBP13.69□□□□□ -0.22
CKAP4-201ENST00000378026 SP5Q6BEB4 398 aaPredicted RBP13.69□□□□□ -0.22
CKAP4-201ENST00000378026 ZNF837Q96EG3 531 aaPredicted RBP13.69□□□□□ -0.22
CKAP4-201ENST00000378026 SMIM7Q9BQ49 75 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 ACTR3CQ9C0K3 210 aaPredicted RBP13.69□□□□□ -0.22
CKAP4-201ENST00000378026 FBRSQ9HAH7 460 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 TCFL5Q9UL49 500 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 SDK2Q58EX2 2172 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 A0A1B0GWJ7 208 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 PATE4P0C8F1 98 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 BLKP51451 505 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 RAB4BP61018 213 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 TESK1Q15569 626 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 PLPPR5Q32ZL2 321 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 FAM185AQ8N0U4 392 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms