RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 WSB1Q9Y6I7 421 aa9.53□□□□□ -0.88
HIF3A-205ENST00000377670 LOC102723971A0A1B0GUV8 181 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 TMEM8BA6NDV4 472 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 MMP7P09237 267 aaPredicted RBP9.52□□□□□ -0.88
HIF3A-205ENST00000377670 FBXW9Q5XUX1 488 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 C11orf42Q8N5U0 333 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 IL22RA2Q969J5 263 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 MISP3Q96FF7 219 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 FAM210BQ96KR6 192 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 FLRT3Q9NZU0 649 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 B9D1Q9UPM9 204 aa9.52□□□□□ -0.88
HIF3A-205ENST00000377670 DBX1A6NMT0 343 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 SLC17A2O00624 439 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 SPRY1O43609 319 aaPredicted RBP9.52□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF205O95201 554 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 P2RY6Q15077 328 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 ACSM6Q6P461 480 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
HIF3A-205ENST00000377670 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 ISOC2Q96AB3 205 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 TMUB1Q9BVT8 246 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 LOC102724200A0A096LPH7 203 aaPredicted RBP9.52□□□□□ -0.89
HIF3A-205ENST00000377670 TMEM272A0A1B0GTI8 110 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 VDAC1P21796 283 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 FAM181AQ8N9Y4 354 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF501Q96CX3 271 aaPredicted RBP9.52□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF665Q9H7R5 613 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 LOC101059948A0A1B0GTJ6 334 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 CLEC18AA5D8T8 446 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 CLDN34H7C241 214 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 SOX15O60248 233 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 ARG1P05089 322 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 GFRA1P56159 465 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 CLEC18CQ8NCF0 446 aa9.52□□□□□ -0.89
HIF3A-205ENST00000377670 PPIAL4EA0A075B759 164 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 PPIAL4DF5H284 164 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 SPINK4O60575 86 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 HRASP01112 189 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 PPIAL4FP0DN26 164 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 CD200P41217 278 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 RAB32Q13637 225 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MRM1Q6IN84 353 aaKnown RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MCHR2Q969V1 340 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 NUDT16L1Q9BRJ7 211 aaKnown RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 SEBOXQ9HB31 216 aaPredicted RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 RAB18Q9NP72 206 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 PPIAL4AQ9Y536 164 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 C9orf170A2RU37 121 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 CYR61O00622 381 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MPZL1O95297 269 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 INPP5JQ15735 1006 aaPredicted RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 TMEM251Q8N6I4 163 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MIOXQ9UGB7 285 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 V9GYH0 126 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 TRBV5-3A0A0A0MS03 114 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 FAM214BQ7L5A3 538 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 SPACA3Q8IXA5 215 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 ZDHHC22Q8N966 263 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 ADPRHL1Q8NDY3 354 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 IGHV1-45A0A0A0MS14 117 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MEX3AA1L020 520 aaKnown RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 DEFB108AA8MXU0 73 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 C4orf51C9J302 202 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 M0R143 59 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MPC2O95563 127 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 CXCL3P19876 107 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 HIKESHIQ53FT3 197 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 SLC25A40Q8TBP6 338 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 NOL4LQ96MY1 436 aaPredicted RBP9.51□□□□□ -0.89
HIF3A-205ENST00000377670 IL20Q9NYY1 176 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 NBASA2RRP1 2371 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 RAG2P55895 527 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 SLC37A1P57057 533 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 CEBPEQ15744 281 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 AWAT1Q58HT5 328 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 CRIPAKQ8N1N5 446 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 OR52L2PQ8NGH6 319 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 RFESDQ8TAC1 157 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 LINC01560Q8TB33 94 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 ABHD3Q8WU67 409 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 ACY3Q96HD9 319 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 MSL2Q9HCI7 577 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 UQCC1Q9NVA1 299 aa9.51□□□□□ -0.89
HIF3A-205ENST00000377670 ZSWIM8A7E2V4 1837 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 PCNTO95613 3336 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 LRRC3CA6NJW4 275 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 KIAA1324LA8MWY0 1029 aaPredicted RBP9.5□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF816Q0VGE8 651 aaPredicted RBP9.5□□□□□ -0.89
HIF3A-205ENST00000377670 PNLIPRP3Q17RR3 467 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 DOLPP1Q86YN1 238 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 MEGF10Q96KG7 1140 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 FOXS1O43638 330 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 COX7A2P2O60397 106 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms