RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SSX2Q16385 188 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 PIGYQ3MUY2 71 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 NHLRC3Q5JS37 347 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 LINC00596Q86U02 117 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 NANOGP1Q8N7R0 232 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 DTX3Q8N9I9 347 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 ZNF596Q8TC21 504 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 ORAI1Q96D31 301 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 OR14A2Q96R54 314 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 NKX3-1Q99801 234 aaPredicted RBP13.61□□□□□ -0.23
HMGN4-201ENST00000377575 MND1Q9BWT6 205 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 CDCA4Q9BXL8 241 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 NPFFR1Q9GZQ6 430 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
HMGN4-201ENST00000377575 VCX3BQ9H321 246 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 SCN3BQ9NY72 215 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 PITPNC1Q9UKF7 332 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 ING4Q9UNL4 249 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 ST3GAL6Q9Y274 331 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 MGAM2Q2M2H8 2515 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 TRAV24A0A0B4J272 114 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 TIMM23O14925 209 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 MMP23AO75900 390 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 CDK1P06493 297 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 SERPINA2P20848 420 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 GLP1RP43220 463 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 RBM11P57052 281 aaKnown RBP13.6□□□□□ -0.23
HMGN4-201ENST00000377575 RNLSQ5VYX0 342 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 DYNAPQ8N1N2 210 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 ABHD12Q8N2K0 398 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 OSR2Q8N2R0 312 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 MYDGFQ969H8 173 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 BARHL1Q9BZE3 327 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 NCOR1P1Q9H4R4 102 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 IFT22Q9H7X7 185 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 FBLN5Q9UBX5 448 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 FOXJ3Q9UPW0 622 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 TCF19Q9Y242 345 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 PKD1L1Q8TDX9 2849 aa13.6□□□□□ -0.23
HMGN4-201ENST00000377575 TRAV8-7A0A075B6U6 113 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 MEIKINA0A087WXM9 373 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 F2RL2O00254 374 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
HMGN4-201ENST00000377575 HTR1DP28221 377 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 DYNLT3P51808 116 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 ARHGDIBP52566 201 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 PAX5Q02548 391 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 SRSF4Q08170 494 aaKnown RBP13.59□□□□□ -0.23
HMGN4-201ENST00000377575 GPR176Q14439 515 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 C6orf141Q5SZD1 244 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 LDLRAD2Q5SZI1 272 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 SLC35E4Q6ICL7 350 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 C11orf88Q6PI97 169 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 JAGN1Q8N5M9 183 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 ZNF565Q8N9K5 539 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 OR4P4Q8NGL7 312 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 PIFOQ8TCI5 191 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 DERL3Q96Q80 235 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 TCF7L1Q9HCS4 588 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 KIF25Q9UIL4 384 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 HILPDAQ9Y5L2 63 aa13.59□□□□□ -0.23
HMGN4-201ENST00000377575 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 M0QZ24 198 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 CHST1O43916 411 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 GTF2F2P13984 249 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 CD34P28906 385 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 DOC2BQ14184 412 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 MPV17LQ2QL34 196 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 SLC22A6Q4U2R8 563 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 CDH26Q8IXH8 852 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 OR2T6Q8NHC8 308 aa13.58□□□□□ -0.24
HMGN4-201ENST00000377575 DPCDQ9BVM2 203 aaPredicted RBP13.58□□□□□ -0.24
HMGN4-201ENST00000377575 MRPS28Q9Y2Q9 187 aaKnown RBP13.58□□□□□ -0.24
HMGN4-201ENST00000377575 KBTBD11-OT1A0A1B0GTJ5 212 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 A0A1W2PPK0 400 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 FAM172BPA6NC97 362 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 PTGES3LE9PB15 166 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 H3BUI4 141 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 TOR1AO14656 332 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 MAS1P04201 325 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 CEACAM3P40198 252 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 KIR2DS4P43632 304 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 C17orf58Q2M2W7 97 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 RSBN1Q5VWQ0 802 aaPredicted RBP13.57□□□□□ -0.24
HMGN4-201ENST00000377575 AWAT2Q6E213 333 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 TREML4Q6UXN2 200 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 SUMF2Q8NBJ7 301 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 MUL1Q969V5 352 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 CALYQ9NYX4 217 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 DPM3Q9P2X0 92 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 TPRKBQ9Y3C4 175 aa13.57□□□□□ -0.24
HMGN4-201ENST00000377575 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
HMGN4-201ENST00000377575 A0A087X0M5 115 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms