RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 NANOS3P60323 173 aaKnown RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 PAX5Q02548 391 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 MADCAM1Q13477 382 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 RBM39Q14498 530 aaKnown RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 IL13RA2Q14627 380 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 ATXN7L3Q14CW9 347 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 PAN3Q58A45 887 aaKnown RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 FOXB2Q5VYV0 432 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 HIST2H2BDQ6DRA6 164 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 ELP2Q6IA86 826 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 OR8H3Q8N146 312 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 OR51T1Q8NGJ9 327 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 OR5AK2Q8NH90 309 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 TSEN15Q8WW01 171 aaKnown RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 MYDGFQ969H8 173 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 RNF166Q96A37 237 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 GPER1Q99527 375 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 MCRIP2Q9BUT9 160 aaKnown RBP11.78□□□□□ -0.52
HDAC6-204ENST00000376643 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 GMPPBQ9Y5P6 360 aa11.78□□□□□ -0.52
HDAC6-204ENST00000376643 MEIKINA0A087WXM9 373 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 E9PQ18 207 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 H0YJX3 145 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 EI24O14681 340 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 FGF16O43320 207 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 NFYBP25208 207 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 SLC35B1P78383 322 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 RAB40BQ12829 278 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 ZNF691Q5VV52 312 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 Q6P435 159 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 Q6ZS46 218 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 COMMD1Q8N668 190 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 OR51A4Q8NGJ6 313 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 CHPT1Q8WUD6 406 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 COQ2Q96H96 371 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 SPACA5Q96QH8 159 aa11.77□□□□□ -0.53
HDAC6-204ENST00000376643 PAK1IP1Q9NWT1 392 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-204ENST00000376643 PSMB11A5LHX3 300 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 LY6LH3BQJ8 138 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 IL1AP01583 271 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 IGLL1P15814 213 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 JUNBP17275 347 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-204ENST00000376643 ZP1P60852 638 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 RSU1Q15404 277 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 C9orf152Q5JTZ5 239 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 LINC00596Q86U02 117 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 LGALS12Q96DT0 336 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 C9orf16Q9BUW7 83 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 RAB9BQ9NP90 201 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 FAM118AQ9NWS6 357 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 IDI2-AS1Q9NZ38 188 aa11.76□□□□□ -0.53
HDAC6-204ENST00000376643 RPL36Q9Y3U8 105 aaKnown RBP11.76□□□□□ -0.53
HDAC6-204ENST00000376643 FAM172BPA6NC97 362 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 J3QR06 171 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 ZFPL1O95159 310 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 CD24P25063 80 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 PPP3R1P63098 170 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 HES1Q14469 280 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 C17orf58Q2M2W7 97 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 KLHL22Q53GT1 634 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 FOXRED2Q8IWF2 684 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 OR10AC1Q8NH08 325 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 CNIH3Q8TBE1 160 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 TNFAIP8L1Q8WVP5 186 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 PYDC1Q8WXC3 89 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 S100A13Q99584 98 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 JAM3Q9BX67 310 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 GON7Q9BXV9 100 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 FAM192AQ9GZU8 254 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 ING3Q9NXR8 418 aa11.75□□□□□ -0.53
HDAC6-204ENST00000376643 IRGMA1A4Y4 181 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A18PA6NE21 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A16PA6NEW6 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A20PA6NIJ5 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A9PA6NNJ1 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A12PA8MX19 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A5PA8MXJ8 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 ZNF780AO75290 641 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-204ENST00000376643 MPIG6BO95866 241 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 CSTBP04080 98 aaKnown RBP11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A15PP0C7V4 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A13PP0C7W8 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A14PP0C7W9 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 FAM90A24PP0C7X0 464 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 TMEM11P17152 192 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 GZMHP20718 246 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 GP2P55259 537 aaKnown RBP11.74□□□□□ -0.53
HDAC6-204ENST00000376643 CDK5R1Q15078 307 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 CCDC58Q4VC31 144 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 BAIAP2L2Q6UXY1 529 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 LHFPL3Q86UP9 236 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 GPR148Q8TDV2 347 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 NR1H4Q96RI1 486 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-204ENST00000376643 ERVK13-1Q9NX77 482 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms