RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CALHM1Q8IU99 346 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 Q8WTZ3 238 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 PIGCQ92535 297 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 MUCL1Q96DR8 90 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 ALKBH3Q96Q83 286 aaPredicted RBP13.07□□□□□ -0.32
MSH5-203ENST00000375750 SUCNR1Q9BXA5 334 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 ZNF442Q9H7R0 627 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 S100PP25815 95 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 RBP2P50120 134 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 SUCLG1P53597 346 aaKnown RBP13.07□□□□□ -0.32
MSH5-203ENST00000375750 MLF1P58340 268 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 IL13RA2Q14627 380 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 GNMTQ14749 295 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 DAZAP2Q15038 168 aaPredicted RBP13.07□□□□□ -0.32
MSH5-203ENST00000375750 ZNF674Q2M3X9 581 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 HIST2H3PS2Q5TEC6 136 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 CYB561D1Q8N8Q1 229 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 PROK2Q9HC23 129 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 STRAPQ9Y3F4 350 aaKnown RBP13.07□□□□□ -0.32
MSH5-203ENST00000375750 C3orf85A0A1B0GTC6 90 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ZNF587BE7ETH6 402 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 OR7C1O76099 320 aaPredicted RBP13.06□□□□□ -0.32
MSH5-203ENST00000375750 NRASP01111 189 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ERVFRD-1P60508 538 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ARL6IP1Q15041 203 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 TRIP6Q15654 476 aaKnown RBP13.06□□□□□ -0.32
MSH5-203ENST00000375750 OR2B11Q5JQS5 317 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 OSR2Q8N2R0 312 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 OR5C1Q8NGR4 320 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 MOB3AQ96BX8 217 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 HSD17B6O14756 317 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ADAM20O43506 726 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ZIC3O60481 467 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 IGHEP01854 428 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ZNF32P17041 273 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 CRYGSP22914 178 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 PMELP40967 661 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 HTR5AP47898 357 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 DYNLT3P51808 116 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 HERV-K104P61576 105 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 ZNF92Q03936 586 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 IZUMO4Q1ZYL8 232 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 TMEM164Q5U3C3 297 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 RTL6Q6ICC9 239 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 C17orf78Q8N4C9 275 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 TOLLIPQ9H0E2 274 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 SLC7A10Q9NS82 523 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
MSH5-203ENST00000375750 PCSK5Q92824 1860 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 H3BP45 60 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 MPPED1O15442 326 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 PPYP01298 95 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 IFNA17P01571 189 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 IGHV3-9P01782 118 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 DTYMKP23919 212 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 GNRHRP30968 328 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 DLK1P80370 383 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 TBC1D26Q86UD7 250 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 PAPOLGQ9BWT3 736 aaKnown RBP13.05□□□□□ -0.32
MSH5-203ENST00000375750 TMPRSS5Q9H3S3 457 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 ZNF286AQ9HBT8 521 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 CRIM1Q9NZV1 1036 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 DOK5Q9P104 306 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
MSH5-203ENST00000375750 UBE2J1Q9Y385 318 aaPredicted RBP13.05□□□□□ -0.32
MSH5-203ENST00000375750 TERTO14746 1132 aaKnown RBP13.05□□□□□ -0.32
MSH5-203ENST00000375750 SYNGR3O43761 229 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 F10P00742 488 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
MSH5-203ENST00000375750 NKX2-1P43699 371 aaPredicted RBP13.05□□□□□ -0.32
MSH5-203ENST00000375750 UBE2KP61086 200 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 ZNF154Q13106 437 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 C11orf1Q9H5F2 150 aa13.05□□□□□ -0.32
MSH5-203ENST00000375750 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 LOC102725191A0A1B0GVB3 256 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 TNFSF15O95150 251 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 MDKP21741 143 aaPredicted RBP13.04□□□□□ -0.32
MSH5-203ENST00000375750 PLCXD3Q63HM9 321 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 MYPOPQ86VE0 399 aaPredicted RBP13.04□□□□□ -0.32
MSH5-203ENST00000375750 TMEM252Q8N6L7 170 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 ANGPTL4Q9BY76 406 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 BCO1Q9HAY6 547 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 IGKV1D-13A0A0B4J2D9 117 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 TRDCB7Z8K6 153 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 SCTP09683 121 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 IGKV1-13P0DP09 117 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 HOXA5P20719 270 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 ICAM4Q14773 271 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 ELOBQ15370 118 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 ZNF818PQ6ZRF7 136 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 ZNF429Q86V71 674 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms