RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MS4A6AQ9H2W1 248 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 SEC61A2Q9H9S3 476 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 HES4Q9HCC6 221 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 GNG12Q9UBI6 72 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 HS3ST2Q9Y278 367 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 POLDIP2Q9Y2S7 368 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 MYLKQ15746 1914 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 VWA8A3KMH1 1905 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 MIA3Q5JRA6 1907 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 RNF222A6NCQ9 220 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 TRAPPC6AO75865 159 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 WISP3O95389 354 aaPredicted RBP6.83□□□□□ -1.32
USP48-203ENST00000374732 CD14P08571 375 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 CT45A6P0DMU7 189 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 CT45A5P0DMU8 189 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 CT45A7P0DMV0 189 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 DHRS2Q13268 280 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 IL13RA2Q14627 380 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 MELKQ14680 651 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 NKPD1Q17RQ9 610 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 CT45A1Q5HYN5 189 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 OLFML2AQ68BL7 652 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 CT45A3Q8NHU0 189 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 OVCA2Q8WZ82 227 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 GGHQ92820 318 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 ZNF319Q9P2F9 582 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 ORC6Q9Y5N6 252 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 R4GN57 208 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 UNC119BA6NIH7 251 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 E7EQ34 232 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 G3V3Q6 166 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 MFNGO00587 321 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 LYRM1O43325 122 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 CLDN11O75508 207 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 OR7C1O76099 320 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 HBZP02008 142 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 SLC35G6P0C7Q6 338 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 HINT1P49773 126 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 NXPH1P58417 271 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 FHL3Q13643 280 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 AGTRAPQ6RW13 159 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 RSPO2Q6UXX9 243 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 DTX2Q86UW9 622 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 ACVR1CQ8NER5 493 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 FAM206AQ9NX38 181 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 IDI2-AS1Q9NZ38 188 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 MARCH2Q9P0N8 246 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 A0A1W2PRF3 423 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 A0A1W2PRM7 423 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 C7orf77A4D0Y5 90 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 ZNF682O95780 498 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 OXTP01178 125 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 PSG2P11465 335 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 GNB3P16520 340 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 TACR1P25103 407 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 SNRPNP63162 240 aaKnown RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 FABP5Q01469 135 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 MEF2CQ06413 473 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 TMEM97Q5BJF2 176 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 C1QL3Q5VWW1 255 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 FBXL22Q6P050 247 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 NEGR1Q7Z3B1 354 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 ZNF429Q86V71 674 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 OR51A4Q8NGJ6 313 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 OR5K2Q8NHB8 316 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 ATXN7L3BQ96GX2 97 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 PGLYRP2Q96PD5 576 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 SPATA25Q9BR10 227 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 POLR2J3Q9H1A7 115 aaKnown RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 C1orf123Q9NWV4 160 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 LHX3Q9UBR4 397 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 TNRC18O15417 2968 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 B4DEV8 164 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 F5H5P2 479 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 H3BQ15 152 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 H3BS24 57 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 PRKNO60260 465 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 FGF1P05230 155 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 FAM157BP0CG42 384 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 AKAIN1P0CW23 69 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 BCKDHAP12694 445 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 ZNF43P17038 809 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 PGCP20142 388 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 RPL3P39023 403 aaKnown RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 ZNF140P52738 457 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 RPS13P62277 151 aaKnown RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 ADAM8P78325 824 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 EFEMP1Q12805 493 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 ELAVL1Q15717 326 aaKnown RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 ANXA2RQ3ZCQ2 193 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 OTUD3Q5T2D3 398 aaPredicted RBP6.82□□□□□ -1.32
USP48-203ENST00000374732 Q6ZT83 130 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 TMPRSS11BQ86T26 416 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 TMEM178AQ8NBL3 297 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 TMEM204Q9BSN7 226 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 GPR35Q9HC97 309 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 FKBP11Q9NYL4 201 aa6.82□□□□□ -1.32
USP48-203ENST00000374732 FLVCR1Q9Y5Y0 555 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms