RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
SMPDL3B-201ENST00000373888 BARX1Q9HBU1 254 aaPredicted RBP12.26□□□□□ -0.45
SMPDL3B-201ENST00000373888 ING3Q9NXR8 418 aa12.26□□□□□ -0.45
SMPDL3B-201ENST00000373888 RCC2Q9P258 522 aaKnown RBP12.26□□□□□ -0.45
SMPDL3B-201ENST00000373888 GLS2Q9UI32 602 aa12.26□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF222Q9UK12 451 aa12.26□□□□□ -0.45
SMPDL3B-201ENST00000373888 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 IGHV3OR15-7A0A075B7D8 119 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 TRAV38-1A0A0B4J264 116 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 LOC105371267A0A1B0GV96 52 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 RFPL4AA6NLU0 287 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 RFPL4AL1F8VTS6 287 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 H3BUI4 141 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 SH2D1BO14796 132 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 OR7C1O76099 320 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF205O95201 554 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 HAND1O96004 215 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 BLVRBP30043 206 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 CCR6P51684 374 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ATP5J2P56134 94 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 TMEM50BP56557 158 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 TMEM33P57088 247 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 IKZF1Q13422 519 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZMYND11Q15326 602 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 RBMS2Q15434 407 aaKnown RBP12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 PNLIPRP3Q17RR3 467 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ATAD3CQ5T2N8 411 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 STUMQ69YW2 141 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 Q6ZTK2 550 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 PEG10Q86TG7 708 aaKnown RBP12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 TCTE3Q8IZS6 198 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ANGPTL6Q8NI99 470 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 AIFM2Q9BRQ8 373 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 SPACA1Q9HBV2 294 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 MCUBQ9NWR8 336 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF581Q9P0T4 197 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 OR14J1Q9UGF5 321 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 HSF4Q9ULV5 492 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 SPG11Q96JI7 2443 aa12.25□□□□□ -0.45
SMPDL3B-201ENST00000373888 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 ABCA12Q86UK0 2595 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 DEGS1O15121 323 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 PDCD6O75340 191 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 NDUFB6O95139 128 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 OR2H2O95918 312 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 IGHV2-70P01814 119 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 PTHLHP12272 177 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 TBPP20226 339 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 FUT3P21217 361 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 LMO1P25800 156 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 CHATP28329 748 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 PRDX2P32119 198 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 MECP2P51608 486 aaKnown RBP12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 MEF2DQ14814 521 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 PDCD1Q15116 288 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 PLAC9Q5JTB6 97 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 CD276Q5ZPR3 534 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 STEAP1BQ6NZ63 245 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 CD177Q8N6Q3 437 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 CHST4Q8NCG5 386 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 OR5T2Q8NGG2 359 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 RAB3CQ96E17 227 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 MED28Q9H204 178 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 GHITMQ9H3K2 345 aa12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
SMPDL3B-201ENST00000373888 APCP25054 2843 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 A0A0A6YYJ9 748 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 TRAV24A0A0B4J272 114 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 SLC33A1O00400 549 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 TNFRSF13BO14836 293 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF44P15621 663 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 HIST1H1DP16402 221 aaKnown RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 DNASE1P24855 282 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 MDH2P40926 338 aaKnown RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 CEBPDP49716 269 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 KCNJ8Q15842 424 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 METTL11BQ5VVY1 283 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF782Q6ZMW2 699 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 ZNF525Q8N782 197 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 OR4C16Q8NGL9 310 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 NINJ1Q92982 152 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 TIMD4Q96H15 378 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 PECRQ9BY49 303 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 DNTTIP1Q9H147 329 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 GPN1Q9HCN4 374 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
SMPDL3B-201ENST00000373888 MFNGO00587 321 aa12.22□□□□□ -0.45
SMPDL3B-201ENST00000373888 PPIHO43447 177 aaKnown RBP12.22□□□□□ -0.45
SMPDL3B-201ENST00000373888 NDUFA2O43678 99 aa12.22□□□□□ -0.45
SMPDL3B-201ENST00000373888 CD74P04233 296 aa12.22□□□□□ -0.45
SMPDL3B-201ENST00000373888 IL5P05113 134 aa12.22□□□□□ -0.45
SMPDL3B-201ENST00000373888 GLAP06280 429 aa12.22□□□□□ -0.45
SMPDL3B-201ENST00000373888 AMY2BP19961 511 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms