RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 OR4C12Q96R67 309 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF253O75346 499 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 IGHV4-34P06331 123 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 LGALS7P47929 136 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF137PP52743 207 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 NUFIP2Q7Z417 695 aaKnown RBP12.64□□□□□ -0.39
TRAF1-201ENST00000373887 GVQW1Q8N7I0 195 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 A0A0B4J2E0 115 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 A0A1B0GX12 115 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 CD3EP07766 207 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 HLA-DRB3P79483 266 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 FUT7Q11130 342 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 PSG5Q15238 335 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 ATP6V1FQ16864 119 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 SPSB1Q96BD6 273 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 CCL3P10147 92 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF638Q14966 1978 aaKnown RBP12.64□□□□□ -0.39
TRAF1-201ENST00000373887 P01737 135 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 DAOP14920 347 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 LIAT1Q6ZQX7 453 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 RNF165Q6ZSG1 346 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 A0A087X0M5 115 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 A0A1B0GX30 115 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 EPPINO95925 133 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 KLF3P57682 345 aaPredicted RBP12.64□□□□□ -0.39
TRAF1-201ENST00000373887 TSPO2Q5TGU0 170 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 OR4P4Q8NGL7 312 aa12.64□□□□□ -0.39
TRAF1-201ENST00000373887 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
TRAF1-201ENST00000373887 CXorf51AA0A1B0GTR3 108 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
TRAF1-201ENST00000373887 POLR2GP62487 172 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAF1-201ENST00000373887 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 JMJD6Q6NYC1 403 aaPredicted RBP12.63□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 OR2C3Q8N628 320 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 Q9N2K0 584 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 KCNE1BA0A087WTH5 132 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 LINC01387J3KSC0 135 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 ZNHIT1O43257 154 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 LANCL1O43813 399 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 DHRS3O75911 302 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 SSMEM1Q8WWF3 244 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 SNX22Q96L94 193 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 THYN1Q9P016 225 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 GSTZ1O43708 216 aaPredicted RBP12.63□□□□□ -0.39
TRAF1-201ENST00000373887 ACAA1P09110 424 aaPredicted RBP12.63□□□□□ -0.39
TRAF1-201ENST00000373887 LINC00299Q6ZSB3 139 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 NAT8Q9UHE5 227 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 RAB29O14966 203 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 GABRA1P14867 456 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 OR1N2Q8NGR9 330 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 VSIG4Q9Y279 399 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 IGHV3-21A0A0B4J1V1 117 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 SRD5A2P31213 254 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 ADIPOQQ15848 244 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 PIK3IP1Q96FE7 263 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 CFHR5Q9BXR6 569 aa12.63□□□□□ -0.39
TRAF1-201ENST00000373887 NKX2-8O15522 239 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 MPC2O95563 127 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 CELA2AP08217 269 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 MDH2P40926 338 aaKnown RBP12.62□□□□□ -0.39
TRAF1-201ENST00000373887 OR2D3Q8NGH3 330 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 MOGAT1Q96PD6 335 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 LPAR3Q9UBY5 353 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 TMPRSS2O15393 492 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 SP9P0CG40 484 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 COMPP49747 757 aaPredicted RBP12.62□□□□□ -0.39
TRAF1-201ENST00000373887 OR13G1Q8NGZ3 307 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 TP53RKQ96S44 253 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 TBX15Q96SF7 602 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 HSF4Q9ULV5 492 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 CTAG2O75638 210 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 HOXA4Q00056 320 aaPredicted RBP12.62□□□□□ -0.39
TRAF1-201ENST00000373887 ISXQ2M1V0 245 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 MRM1Q6IN84 353 aaKnown RBP12.62□□□□□ -0.39
TRAF1-201ENST00000373887 MYOZ3Q8TDC0 251 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF426Q9BUY5 554 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 F5P12259 2224 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 ASPDHA6ND91 283 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 WNT3P56703 355 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 SLC22A18ASQ8N1D0 253 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 PACRGQ96M98 296 aaPredicted RBP12.62□□□□□ -0.39
TRAF1-201ENST00000373887 RAB1BQ9H0U4 201 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 CNTD2Q9H8S5 307 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 TECRQ9NZ01 308 aaKnown RBP12.62□□□□□ -0.39
TRAF1-201ENST00000373887 CYB5R1Q9UHQ9 305 aa12.62□□□□□ -0.39
TRAF1-201ENST00000373887 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 GNG7O60262 68 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF25P17030 456 aaPredicted RBP12.61□□□□□ -0.39
TRAF1-201ENST00000373887 COL8A1P27658 744 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 hADV38S2A0JD32 116 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms