RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ZNF728P0DKX0 622 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 ZNF44P15621 663 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 RPS2P15880 293 aaKnown RBP21.21■□□□□ 0.99
CTSA-203ENST00000372459 MRGPRGQ86SM5 289 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 RDH5Q92781 318 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 MFFQ9GZY8 342 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 COMMD9Q9P000 198 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 Q9UFV3 132 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 SESN1Q9Y6P5 492 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 TRAV14DV4A0A0A6YYC5 116 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 NXPH2O95156 264 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 SLC34A2O95436 690 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 CRYAAP02489 173 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 Q6P435 159 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 ALKAL2Q6UX46 152 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 SLC51BQ86UW2 128 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 TOMM40LQ969M1 308 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 SEC22AQ96IW7 307 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 ASF1BQ9NVP2 202 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 KIR2DS1A0A191URI9 304 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 KIR2DS4P43632 304 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 FAM27E3Q08E93 113 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 KIR2DS1Q14954 304 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 Q6ZR03 302 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 RAB18Q9NP72 206 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 PRR14LQ5THK1 2151 aa21.2■□□□□ 0.98
CTSA-203ENST00000372459 TRBV6-6A0A0A6YYG2 114 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 IGHV3-64DA0A0J9YX35 117 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 C3orf80F5H4A9 247 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 ZNF205O95201 554 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 SGPP2Q8IWX5 399 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 MOB3AQ96BX8 217 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 PFDN2Q9UHV9 154 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 CEP295Q9C0D2 2601 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 C5orf51A6NDU8 294 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 FXYD4P59646 89 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 ZNF146Q15072 292 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 ANKRD55Q3KP44 614 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 PRR30Q53SZ7 412 aaPredicted RBP21.19■□□□□ 0.98
CTSA-203ENST00000372459 IGSF11Q5DX21 431 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 FIP1L1Q6UN15 594 aaKnown RBP21.19■□□□□ 0.98
CTSA-203ENST00000372459 POC1AQ8NBT0 407 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 CXorf58Q96LI9 332 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 ATP23Q9Y6H3 246 aa21.19■□□□□ 0.98
CTSA-203ENST00000372459 TRDCB7Z8K6 153 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 SCO1O75880 301 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 IFNA2P01563 188 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 SERPINF1P36955 418 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 UCP3P55916 312 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 HERV-K104P61576 105 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 RBPJQ06330 500 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 MZT1Q08AG7 82 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 SPIN3Q5JUX0 258 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 MRPL30Q8TCC3 161 aaKnown RBP21.18■□□□□ 0.98
CTSA-203ENST00000372459 MSL2Q9HCI7 577 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 TUBD1Q9UJT1 453 aa21.18■□□□□ 0.98
CTSA-203ENST00000372459 TEX13DA0A0J9YY54 714 aaPredicted RBP21.17■□□□□ 0.98
CTSA-203ENST00000372459 CRYM-AS1A6NIL9 109 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 OR2H2O95918 312 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 MDH2P40926 338 aaKnown RBP21.17■□□□□ 0.98
CTSA-203ENST00000372459 UBA52P62987 128 aaKnown RBP21.17■□□□□ 0.98
CTSA-203ENST00000372459 ABCA11PQ4W5N1 156 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 OR5T2Q8NGG2 359 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 PPP1R1CQ8WVI7 109 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 PIK3IP1Q96FE7 263 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 TLNRD1Q9H1K6 362 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 ELOVL5Q9NYP7 299 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 SH3BGRL2Q9UJC5 107 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 HEATR1Q9H583 2144 aaKnown RBP21.17■□□□□ 0.98
CTSA-203ENST00000372459 A0A0D9SG52 128 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 C13orf42A0A1B0GVH6 325 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 A0A1B0GWJ7 208 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 SH2D1BO14796 132 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 RBMXP38159 391 aaKnown RBP21.17■□□□□ 0.98
CTSA-203ENST00000372459 PIGPP57054 158 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 C11orf53Q8IXP5 236 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 SLC38A6Q8IZM9 456 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 USB1Q9BQ65 265 aaKnown RBP21.17■□□□□ 0.98
CTSA-203ENST00000372459 HES4Q9HCC6 221 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 TREM2Q9NZC2 230 aa21.17■□□□□ 0.98
CTSA-203ENST00000372459 ATMQ13315 3056 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 TK1P04183 234 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 SCTP09683 121 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 CTXN2P0C2S0 81 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 SLC25A4P12235 298 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 AADACP22760 399 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 GLRXP35754 106 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 CYCSP99999 105 aaKnown RBP21.16■□□□□ 0.98
CTSA-203ENST00000372459 ZNF345Q14585 488 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 PAN3Q58A45 887 aaKnown RBP21.16■□□□□ 0.98
CTSA-203ENST00000372459 PRR13Q9NZ81 148 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 PTPRQQ9UMZ3 2332 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 A6NLC8 198 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 SIRPB1O00241 398 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 PPYP01298 95 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 C11orf87Q6NUJ2 197 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 NMES1Q9C002 83 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 C1orf123Q9NWV4 160 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 DUSP13Q9UII6 198 aa21.16■□□□□ 0.98
CTSA-203ENST00000372459 LOC105371267A0A1B0GV96 52 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms