RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 TMEM235A6NFC5 223 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 H7C1Q1 480 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 SULT1C2O00338 296 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 HSPB6O14558 160 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
TMEM53-204ENST00000372243 PRSS3P35030 304 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 NPY4RP50391 375 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 OLFML2AQ68BL7 652 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 SLC35E4Q6ICL7 350 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 ZNF841Q6ZN19 808 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 SNX29P2Q8IUI4 249 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 TMEM185AQ8NFB2 350 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 PLPPR1Q8TBJ4 325 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 FOXC2Q99958 501 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 WDR12Q9GZL7 423 aaKnown RBP13.17□□□□□ -0.3
TMEM53-204ENST00000372243 NCOR1P1Q9H4R4 102 aa13.17□□□□□ -0.3
TMEM53-204ENST00000372243 SLC25A10Q9UBX3 287 aaPredicted RBP13.17□□□□□ -0.3
TMEM53-204ENST00000372243 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 DVL1O14640 695 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 CD3GP09693 182 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 SELLP14151 372 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 GNG2P59768 71 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 MRPS15P82914 257 aaKnown RBP13.16□□□□□ -0.3
TMEM53-204ENST00000372243 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 ATXN7L3Q14CW9 347 aaPredicted RBP13.16□□□□□ -0.3
TMEM53-204ENST00000372243 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 Q5PR19 223 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 RSBN1Q5VWQ0 802 aaPredicted RBP13.16□□□□□ -0.3
TMEM53-204ENST00000372243 ZNF497Q6ZNH5 498 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 CMSS1Q9BQ75 279 aaKnown RBP13.16□□□□□ -0.3
TMEM53-204ENST00000372243 C12orf4Q9NQ89 552 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 ELF5Q9UKW6 265 aaPredicted RBP13.16□□□□□ -0.3
TMEM53-204ENST00000372243 ITPR2Q14571 2701 aa13.16□□□□□ -0.3
TMEM53-204ENST00000372243 TRBV6-6A0A0A6YYG2 114 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 GABARAPH6UMI1 98 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 GSTZ1O43708 216 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-204ENST00000372243 FCN3O75636 299 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 NAPSAO96009 420 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 IGHV2-5P01817 119 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 PTHLHP12272 177 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 CD40LGP29965 261 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 MADCAM1Q13477 382 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 ZNF846Q147U1 533 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 GDPD1Q8N9F7 314 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 CLDND2Q8NHS1 167 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 GPX8Q8TED1 209 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 SMIM4Q8WVI0 70 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 COQ2Q96H96 371 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 CYYR1Q96J86 154 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 SRRQ9GZT4 340 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 TMEM30CPA0ZSE6 113 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 SSX5O60225 188 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 LPLP06858 475 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 DTYMKP23919 212 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 CBX5P45973 191 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 PPP5CP53041 499 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 P2RX3P56373 397 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 LMO4P61968 165 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 AESQ08117 197 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 PYDC2Q56P42 97 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 KRBOX4Q5JUW0 171 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 NUDCD2Q8WVJ2 157 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 FCAMRQ8WWV6 532 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 RAB39BQ96DA2 213 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 OCSTAMPQ9BR26 566 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 NARFLQ9H6Q4 476 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 CLN8Q9UBY8 286 aa13.15□□□□□ -0.3
TMEM53-204ENST00000372243 MEIOCA2RUB1 952 aa13.14□□□□□ -0.31
TMEM53-204ENST00000372243 MT-ND4P03905 459 aa13.14□□□□□ -0.31
TMEM53-204ENST00000372243 SSBP1Q04837 148 aaKnown RBP13.14□□□□□ -0.31
TMEM53-204ENST00000372243 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM53-204ENST00000372243 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
TMEM53-204ENST00000372243 Q8N402 240 aa13.14□□□□□ -0.31
TMEM53-204ENST00000372243 MRPL30Q8TCC3 161 aaKnown RBP13.14□□□□□ -0.31
TMEM53-204ENST00000372243 DYRK2Q92630 601 aa13.14□□□□□ -0.31
TMEM53-204ENST00000372243 GCDHQ92947 438 aaPredicted RBP13.14□□□□□ -0.31
TMEM53-204ENST00000372243 ASH1LQ9NR48 2969 aaKnown RBP13.14□□□□□ -0.31
TMEM53-204ENST00000372243 TRBV23-1A0A0A0MS06 115 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 IGHV4-61A0A0C4DH41 118 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 HEXAP06865 529 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 NDUFB7P17568 137 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 GNB2P62879 340 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-204ENST00000372243 ESCO2Q56NI9 601 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 ZNF880Q6PDB4 577 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 TRAPPC6BQ86SZ2 158 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-204ENST00000372243 CCDC32Q9BV29 185 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 SSBP3Q9BWW4 388 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-204ENST00000372243 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
TMEM53-204ENST00000372243 LPAR3Q9UBY5 353 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 KIF25Q9UIL4 384 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms