RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM90A27PA6NNH2 459 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 HSPB2A8KAH6 182 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 SP9P0CG40 484 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 RPS4Y1P22090 263 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 FGF8P55075 233 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 UCNP55089 124 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 CTAG1AP78358 180 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 HSPB2Q16082 182 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 RPS4Y2Q8TD47 263 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 MRAP2Q96G30 205 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 M0R082 166 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 HPXP02790 462 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 SFTPCP11686 197 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 TINAGQ9UJW2 476 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 GRPP07492 148 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 GABRA1P14867 456 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 DSCR4P56555 118 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 AQP6Q13520 282 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 MRGPRX4Q96LA9 322 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 ALX4Q9H161 411 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 ANKRD34AQ69YU3 496 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
RAPGEF1-202ENST00000372190 IGHV3-15A0A0B4J1V0 119 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 CYR61O00622 381 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 PRTGQ2VWP7 1150 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ANKRD37Q7Z713 158 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 TGIF2LYQ8IUE0 185 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR10X1Q8NGY0 326 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZNF275Q9NSD4 429 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 SFT2D2O95562 160 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 GPANK1O95872 356 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 RPL27P61353 136 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 FABP5Q01469 135 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 GSG1Q2KHT4 349 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ACSM5Q6NUN0 579 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 KISS1RQ969F8 398 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ANXA10Q9UJ72 324 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 PRRC2BQ5JSZ5 2229 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 RBFOX2O43251 390 aaKnown RBP eCLIP12.47□□□□□ -0.411e-5■■■■□ 19.7
RAPGEF1-202ENST00000372190 PTP4A3O75365 173 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 FAHP16930 419 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 GALMQ96C23 342 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 FLRT3Q9NZU0 649 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ARRDC5A6NEK1 342 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 PEX11BO96011 259 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 TYMSP04818 313 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 FCGR3AP08637 254 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 FOLR2P14207 255 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 JMJD6Q6NYC1 403 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 MUC15Q8N387 334 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 MRPS24Q96EL2 167 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 VN1R1Q9GZP7 353 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 KLK11Q9UBX7 282 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZNF735P0CB33 412 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM65Q6PI78 240 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM179BQ7Z7N9 219 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR2V1Q8NHB1 315 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 PIK3IP1Q96FE7 263 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 EMC6Q9BV81 110 aa12.47□□□□□ -0.41
RAPGEF1-202ENST00000372190 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 STARD6P59095 220 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 FUT7Q11130 342 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 LRRC29Q8WV35 223 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 IGHA1P01876 353 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 IGHA2P01877 340 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 SLC2A10O95528 541 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 C16orf82Q7Z2V1 217 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 SYS1Q8N2H4 156 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 SAP30LQ9HAJ7 183 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 SLC25A19Q9HC21 320 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
RAPGEF1-202ENST00000372190 TRAV8-2A0A0B4J237 113 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 TRAV1-2A0A0B4J238 106 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 ADAP1O75689 374 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 OPRM1P35372 400 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 RELBQ01201 579 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 SH2D5Q6ZV89 423 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR2C3Q8N628 320 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 PRR7Q8TB68 274 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 KTI12Q96EK9 354 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms