RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MRM1Q6IN84 353 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 BHLHA15Q7RTS1 189 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 RCC2Q9P258 522 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 A0A1W2PQD3 144 aa11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 BPIFB3P59826 476 aa11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 CD300CQ08708 224 aa11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 TMEM249Q2WGJ8 235 aa11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 DRAM2Q6UX65 266 aa11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-201ENST00000372189 SERTM2A0A1B0GWG4 89 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 MT-ND6P03923 174 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 DHRS2Q13268 280 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 CLEC12BQ2HXU8 276 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 ERGIC1Q969X5 290 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 PLAC1Q9HBJ0 212 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 PEBP1P30086 187 aaKnown RBP11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 BTNL3Q6UXE8 466 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 CHST6Q9GZX3 395 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 FZR1Q9UM11 496 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 PLA1AQ53H76 456 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 ANKRD20A5PA0PJZ0 165 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 NCBP2LA6PVI3 153 aaKnown RBP11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 PRSS23O95084 383 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 HFEQ30201 348 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 DPPA3Q6W0C5 159 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 PP6455Q8WZ26 134 aa11.78□□□□□ -0.52
RAPGEF1-201ENST00000372189 H0Y980 276 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 GSTZ1O43708 216 aaPredicted RBP11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 CD3EP07766 207 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 FAHP16930 419 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 ROM1Q03395 351 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PTPMT1Q8WUK0 201 aaPredicted RBP11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PELI1Q96FA3 418 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 ZNFX1Q9P2E3 1918 aaKnown RBP11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PARP14Q460N5 1801 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 TRBV23-1A0A0A0MS06 115 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PLPP3O14495 311 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 CTDSPLO15194 276 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PPIHO43447 177 aaKnown RBP11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 CTAG2O75638 210 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 DAOP14920 347 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 SLC6A1P30531 599 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 RAC3P60763 192 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 DLK1P80370 383 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 C19orf57Q0VDD7 668 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PPP1R1AQ13522 171 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 INSL4Q14641 139 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 ADIPOQQ15848 244 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 LYPD8Q6UX82 237 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 PAM16Q9Y3D7 125 aa11.77□□□□□ -0.52
RAPGEF1-201ENST00000372189 GREM1O60565 184 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 PMP22Q01453 160 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 FMODQ06828 376 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 OXLD1Q5BKU9 147 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 SAP25Q8TEE9 199 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF764Q96H86 408 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 LPAR5Q9H1C0 372 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 V9GYH0 126 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 TRGV10A0A0A0MS01 117 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 CLDN34H7C241 214 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 RNF133Q8WVZ7 376 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 TCRBV16S1A1N1A0A5B0 115 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 MPC2O95563 127 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 COX6CP09669 75 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 TIAL1Q01085 375 aaKnown RBP eCLIP11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 WDR38Q5JTN6 314 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 DEGS2Q6QHC5 323 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF501Q96CX3 271 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 TSPAN32Q96QS1 320 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 COL25A1Q9BXS0 654 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 NMES1Q9C002 83 aa11.77□□□□□ -0.53
RAPGEF1-201ENST00000372189 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 A6NJY4 79 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CDX4O14627 284 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 C3AR1Q16581 482 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 PABPC1L2AQ5JQF8 200 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 VSTM2LQ96N03 204 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 RAB1BQ9H0U4 201 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 WSB1Q9Y6I7 421 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 UBE2L5PA0A1B0GUS4 154 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CD96P40200 585 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 SLC37A1P57057 533 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms