RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 FAM90A16PA6NEW6 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A20PA6NIJ5 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A8PA6NJQ4 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A7PA6NKC0 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A22PA8MWA6 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A12PA8MX19 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A5PA8MXJ8 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A23PA8MXZ1 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A15PP0C7V4 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A13PP0C7W8 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A14PP0C7W9 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A24PP0C7X0 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ZNF728P0DKX0 622 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 JUNBP17275 347 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-204ENST00000370496 GLP1RP43220 463 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 GLIPR1P48060 266 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 DLX1P56177 255 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 CLDN12P56749 244 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 GUCA2AQ02747 115 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 KLRD1Q13241 179 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 RUSC1-AS1Q66K80 236 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 METAP1DQ6UB28 335 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ZNF418Q8TF45 676 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-204ENST00000370496 SUCNR1Q9BXA5 334 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 GAL3ST2Q9H3Q3 398 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ZNF69Q9UC07 566 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 MEIKINA0A087WXM9 373 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 IGHV1-69DA0A0B4J2H0 117 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 CENPVL3A0A0U1RRI6 287 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 IFITM5A6NNB3 132 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 AIREO43918 545 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 CLPXO76031 633 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 IGHV1-69P01742 117 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 RBP4P02753 201 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 CD37P11049 281 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 PRTN3P24158 256 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
COL9A1-204ENST00000370496 UNC119Q13432 240 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 NKAPLQ5M9Q1 402 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 RAB12Q6IQ22 244 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 ZNF782Q6ZMW2 699 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-204ENST00000370496 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 OR2W3Q7Z3T1 314 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 TPRA1Q86W33 373 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 PRIMA1Q86XR5 153 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 SLC25A28Q96A46 364 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 FAM3DQ96BQ1 224 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
COL9A1-204ENST00000370496 BARHL1Q9BZE3 327 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 RCC2Q9P258 522 aaKnown RBP12.17□□□□□ -0.46
COL9A1-204ENST00000370496 KIF25Q9UIL4 384 aa12.17□□□□□ -0.46
COL9A1-204ENST00000370496 UBE2J1Q9Y385 318 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-204ENST00000370496 TMEM30CPA0ZSE6 113 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 TMEM14DPA8MWL7 114 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 MCRIP1C9JLW8 97 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 RNASEK-C17orf49H0YIS7 233 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 H3BUI4 141 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 AIPO00170 330 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 TCF21O43680 179 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 PDCD6O75340 191 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 COX7A1P24310 79 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 BPIFB3P59826 476 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 MXD1Q05195 221 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 RBM39Q14498 530 aaKnown RBP12.16□□□□□ -0.46
COL9A1-204ENST00000370496 RSBN1Q5VWQ0 802 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-204ENST00000370496 RBMS3Q6XE24 437 aaKnown RBP12.16□□□□□ -0.46
COL9A1-204ENST00000370496 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 YIPF6Q96EC8 236 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 CENPOQ9BU64 300 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 UNKLQ9H9P5 680 aaKnown RBP12.16□□□□□ -0.46
COL9A1-204ENST00000370496 LIN7BQ9HAP6 207 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 PEX16Q9Y5Y5 336 aa12.16□□□□□ -0.46
COL9A1-204ENST00000370496 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 A0A1W2PRD5 423 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 A0A1W2PRF3 423 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 A0A1W2PRM7 423 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 NOTOA8MTQ0 251 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 FUT3P21217 361 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 CFPP27918 469 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 SDC2P34741 201 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 DLX6P56179 175 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 QRFPP83859 136 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 BRICD5Q6PL45 260 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 GDPGP1Q6ZNW5 385 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-204ENST00000370496 NEDD4LQ96PU5 975 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 NICN1Q9BSH3 213 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 ETAA1Q9NY74 926 aa12.15□□□□□ -0.46
COL9A1-204ENST00000370496 JMJD1CQ15652 2540 aa12.15□□□□□ -0.47
COL9A1-204ENST00000370496 C17orf98A8MV24 154 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 NPFFO15130 113 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 LSM3P62310 102 aaKnown RBP12.14□□□□□ -0.47
COL9A1-204ENST00000370496 PAX5Q02548 391 aa12.14□□□□□ -0.47
COL9A1-204ENST00000370496 PRAMEF5Q5TYX0 476 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms