RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 GRK1Q15835 563 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 PNLIPRP3Q17RR3 467 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 SLC36A1Q7Z2H8 476 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 ZNF561Q8N587 486 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 TMEM185AQ8NFB2 350 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 THAP7Q9BT49 309 aaPredicted RBP9.13□□□□□ -0.95
BRCC3-204ENST00000369462 GSX2Q9BZM3 304 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 NARFLQ9H6Q4 476 aa9.13□□□□□ -0.95
BRCC3-204ENST00000369462 NKX6-3A6NJ46 265 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 K7N7A8 449 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 TNFRSF13BO14836 293 aaPredicted RBP9.12□□□□□ -0.95
BRCC3-204ENST00000369462 SIGLEC5O15389 551 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 NDUFA2O43678 99 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 LANCL1O43813 399 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 SSX5O60225 188 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 FSTL3O95633 263 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 GLAP06280 429 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 LPLP06858 475 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 CSF3P09919 207 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 OR3A1P47881 315 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 PDLIM4P50479 330 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 MRPS10P82664 201 aaKnown RBP9.12□□□□□ -0.95
BRCC3-204ENST00000369462 TRAPPC6BQ86SZ2 158 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 MUC20Q8N307 709 aaPredicted RBP9.12□□□□□ -0.95
BRCC3-204ENST00000369462 PLPPR1Q8TBJ4 325 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 GPX8Q8TED1 209 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 SNX22Q96L94 193 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 ABCB10Q9NRK6 738 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 CEACAM18A8MTB9 384 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 TK1P04183 234 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 PAX1P15863 534 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 AESQ08117 197 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 EDDM3AQ14507 147 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 GVQW1Q8N7I0 195 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 TPRX1Q8N7U7 411 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 PPP1R35Q8TAP8 253 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 FAM168AQ92567 244 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 MED30Q96HR3 178 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 BPESC1Q9GZL8 116 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 DNTTIP1Q9H147 329 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 SCPEP1Q9HB40 452 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 C12orf4Q9NQ89 552 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 ZNF230Q9UIE0 474 aaPredicted RBP9.12□□□□□ -0.95
BRCC3-204ENST00000369462 KIAA2026Q5HYC2 2103 aa9.12□□□□□ -0.95
BRCC3-204ENST00000369462 ORC5O43913 435 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 RBBP9O75884 186 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 IL7P13232 177 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 CLEC2AQ6UVW9 174 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 FGFRL1Q8N441 504 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 MAFIPQ8WZ33 124 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 CCDC32Q9BV29 185 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 ST6GALNAC5Q9BVH7 336 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 CHMP1AQ9HD42 196 aaPredicted RBP9.11□□□□□ -0.95
BRCC3-204ENST00000369462 CTSZQ9UBR2 303 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 MALRD1Q5VYJ5 2156 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 SULT1C2O00338 296 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 GSTZ1O43708 216 aaPredicted RBP9.11□□□□□ -0.95
BRCC3-204ENST00000369462 CA11O75493 328 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 DEFB113Q30KQ7 82 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 TRIQKQ629K1 86 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 C16orf87Q6PH81 154 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 DNM1P46Q6ZS02 220 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 OR4K15Q8NH41 348 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 BORCS5Q969J3 196 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 KAAG1Q9UBP8 84 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 MTFP1Q9UDX5 166 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 PCDHB10Q9UN67 800 aa9.11□□□□□ -0.95
BRCC3-204ENST00000369462 MEX3AA1L020 520 aaKnown RBP9.1□□□□□ -0.95
BRCC3-204ENST00000369462 MGST3O14880 152 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 NAPSAO96009 420 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 CSN2P05814 226 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 RPS2P15880 293 aaKnown RBP9.1□□□□□ -0.95
BRCC3-204ENST00000369462 NDUFB7P17568 137 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 GIFP27352 417 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 GDNFP39905 211 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 GLIPR1P48060 266 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 KCNJ3P48549 501 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 EDDM3BP56851 147 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 TMEM155Q4W5P6 130 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 KRBOX4Q5JUW0 171 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 SHEQ5VZ18 495 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 GDPD3Q7L5L3 318 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 SPICQ8N5J4 248 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 OR5D13Q8NGL4 314 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 CCDC107Q8WV48 283 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 TRIM63Q969Q1 353 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 COQ2Q96H96 371 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 IFT46Q9NQC8 304 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 BEX4Q9NWD9 120 aaPredicted RBP9.1□□□□□ -0.95
BRCC3-204ENST00000369462 SLC25A10Q9UBX3 287 aaPredicted RBP9.1□□□□□ -0.95
BRCC3-204ENST00000369462 KIF25Q9UIL4 384 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 TRAV39A0A0B4J263 110 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 LINC00854A0A1B0GVQ3 168 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 A0A1W2PQ09 198 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 DVL1O14640 695 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 NDUFB3O43676 98 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 UPK1BO75841 260 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 IFITM3Q01628 133 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 RSBN1Q5VWQ0 802 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms