RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PLEKHA3Q9HB20 300 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 UQCC1Q9NVA1 299 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 STRAPQ9Y3F4 350 aaKnown RBP7.34□□□□□ -1.24
PTPRK-206ENST00000368215 ESPL1Q14674 2120 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SYNGR1O43759 233 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 KLF7O75840 302 aaPredicted RBP7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SCTP09683 121 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 METTL15P1P0C7V9 234 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 NKX6-1P78426 367 aaPredicted RBP7.33□□□□□ -1.24
PTPRK-206ENST00000368215 FAM3AP98173 230 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 ADIRFQ15847 76 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 HIST2H3PS2Q5TEC6 136 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 TMEM54Q969K7 222 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 ERGIC1Q969X5 290 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 OR2J1Q9GZK6 312 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 LPAR3Q9UBY5 353 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 RAB19A4D1S5 217 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 CLEC18AA5D8T8 446 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 OR5B21A6NL26 309 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 MPGP29372 298 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 GPR12P47775 334 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 NHLH2Q02577 135 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 RAB31Q13636 194 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SPINK9Q5DT21 86 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 CLEC18CQ8NCF0 446 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 MRGPRDQ8TDS7 321 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 H1FXQ92522 213 aaKnown RBP7.33□□□□□ -1.24
PTPRK-206ENST00000368215 FRZBQ92765 325 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 Q96M66 194 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 TAAR3PQ9P1P4 343 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 PRELID3BQ9Y3B1 194 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 MPC1Q9Y5U8 109 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 NPTNQ9Y639 398 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 PMS2P1A4D2B8 440 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 TRDCB7Z8K6 153 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SHOXO15266 292 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 C1QL1O75973 258 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 TMEM211Q6ICI0 200 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SLC23A3Q6PIS1 610 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 OVCH2Q7RTZ1 564 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 TIPARPQ7Z3E1 657 aaKnown RBP7.33□□□□□ -1.24
PTPRK-206ENST00000368215 NKX2-8O15522 239 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 OR2C1O95371 312 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 DAOP14920 347 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SLC25A53Q5H9E4 307 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 FBXW9Q5XUX1 488 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 LHX4Q969G2 390 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 ADGRG7Q96K78 797 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 SLC2A8Q9NY64 477 aa7.33□□□□□ -1.24
PTPRK-206ENST00000368215 NUP210Q8TEM1 1887 aaPredicted RBP7.32□□□□□ -1.24
PTPRK-206ENST00000368215 HTTP42858 3142 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 TRAV14DV4A0A0A6YYC5 116 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 MFSD2BA6NFX1 497 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 MSGN1A6NI15 193 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 KLK10O43240 276 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 CHST1O43916 411 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 HEXAP06865 529 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 CLEC12BQ2HXU8 276 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 NUFIP2Q7Z417 695 aaKnown RBP7.32□□□□□ -1.24
PTPRK-206ENST00000368215 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 SLC25A40Q8TBP6 338 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 MSL2Q9HCI7 577 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 COL4A3Q01955 1670 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 UBE2L5PA0A1B0GUS4 154 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 TMEM30CPA0ZSE6 113 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 RPL36A-HNRNPH2H7BZ11 118 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 MELTFP08582 738 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 SNCAP37840 140 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 RPP30P78346 268 aaKnown RBP7.32□□□□□ -1.24
PTPRK-206ENST00000368215 IL13RA2Q14627 380 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 SMIM21Q3B7S5 101 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF787Q6DD87 383 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 STPG2Q8N412 459 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 PTGDSP41222 190 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 LPAR6P43657 344 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 ID4P47928 161 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 DYNLT3P51808 116 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 CASP6P55212 293 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 FLI1Q01543 452 aaPredicted RBP7.32□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF154Q13106 437 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 GUCA2BQ16661 112 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 LY6G6FQ5SQ64 297 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 RBMS3Q6XE24 437 aaKnown RBP7.32□□□□□ -1.24
PTPRK-206ENST00000368215 OR5A2Q8NGI9 324 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 ABHD5Q8WTS1 349 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 OR2D2Q9H210 308 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 RAB9BQ9NP90 201 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 PSG11Q9UQ72 335 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 BRCA2P51587 3418 aa7.32□□□□□ -1.24
PTPRK-206ENST00000368215 A0A0A6YYD4 124 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ACTL6AO96019 429 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF735P0CB33 412 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 DVL1P1P54792 670 aaPredicted RBP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 NDUFA6P56556 154 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 BTNL3Q6UXE8 466 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 TPRX1Q8N7U7 411 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF610Q8N9Z0 462 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms