RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NOX4Q9NPH5 578 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 FAM240AA0A1B0GVK7 77 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MDKP21741 143 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 UQCRFS1P47985 274 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PDCD1Q15116 288 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 AWAT1Q58HT5 328 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RSPO2Q6UXX9 243 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR4S2Q8NH73 311 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 AAMDCQ9H7C9 122 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PLBD1Q6P4A8 553 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 LYPD6BQ8NI32 183 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TBC1D29Q9UFV1 150 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TMEFF2Q9UIK5 374 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 LSM2Q9Y333 95 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TNFRSF1AP19438 455 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RPS24P62847 133 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PRSS36Q5K4E3 855 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TMPRSS11DO60235 418 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 HPXP02790 462 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 THBDP07204 575 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PPICP45877 212 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ERHP84090 104 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 IL22RA1Q8N6P7 574 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ZMYND19Q96E35 227 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MARCH4Q9P2E8 410 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF443Q9Y2A4 671 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 KCPQ6ZWJ8 1503 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 B4DGG1 531 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 DCAF10Q5QP82 559 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PDPNQ86YL7 162 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR2C3Q8N628 320 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SELENOKQ9Y6D0 94 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 LTBP4Q8N2S1 1624 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 J3KTA2 159 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 UTS2O95399 124 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MT-CO3P00414 261 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 AREGP15514 252 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RNFT1Q5M7Z0 435 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ABHD3Q8WU67 409 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 FTSJ1Q9UET6 329 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 FAM208AQ9UK61 1670 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR4C46A6NHA9 309 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CHEK1O14757 476 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RND2P52198 227 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PRSS8Q16651 343 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PLCXD3Q63HM9 321 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 NPBWR1P48145 328 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 WIPF2Q8TF74 440 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MCHR2Q969V1 340 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ZFP62Q8NB50 900 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 LHX4Q969G2 390 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 IL17FQ96PD4 163 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ZIC5Q96T25 663 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 IGLV3-25P01717 112 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF684Q5T5D7 378 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SEC16AO15027 2179 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 C1QCP02747 245 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MRPS36P82909 103 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 DMRTC2Q8IXT2 367 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MRAPQ8TCY5 172 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 AMMECR1Q9Y4X0 333 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV18A0A075B6X5 111 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM213A2RRL7 107 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 F2Z2F3 143 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SLC16A7O60669 478 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 DEFB132Q7Z7B7 95 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CAMTA1Q9Y6Y1 1673 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TSEN54Q7Z6J9 526 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CALHM1Q8IU99 346 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR4C45A6NMZ5 311 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 NEURL1O76050 574 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 HOXA5P20719 270 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR2Z1Q8NG97 314 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MBOAT4Q96T53 435 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CLRN1P58418 232 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 GPR146Q96CH1 333 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RPEL1Q2QD12 228 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 PARS2Q7L3T8 475 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 AMIGO3Q86WK7 504 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR52I1Q8NGK6 324 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 NALCNQ8IZF0 1738 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 A0A0U1RQK1 487 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 hADV38S2A0JD32 116 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SGSHP51688 502 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RUNX1Q01196 453 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR8B3Q8NGG8 313 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR1L3Q8NH93 324 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MYH4Q9Y623 1939 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CHD1O14646 1710 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ZFAND5O76080 213 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FLT3LGP49771 235 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FCF1Q9Y324 198 aaKnown RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SH2D1BO14796 132 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PDCD6O75340 191 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 GNG13Q9P2W3 67 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms