RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 POLEQ07864 2286 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 SOCS1O15524 211 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 CST7O76096 145 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PDGFAP04085 211 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 FAM27E3Q08E93 113 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 GUCA2BQ16661 112 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 RIPPLY2Q5TAB7 128 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 OR13D1Q8NGV5 346 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 KLHDC2Q9Y2U9 406 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 TMEM210A6NLX4 147 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 SURF2Q15527 256 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 GVQW1Q8N7I0 195 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ABHD14AQ9BUJ0 271 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PCDHGA9Q9Y5G4 932 aaKnown RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 NME2P1O60361 137 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PGA3P0DJD8 388 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PDZK1IP1Q13113 114 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 FAM122BQ7Z309 247 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 SKA3Q8IX90 412 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ADAT3Q96EY9 351 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 OR2V2Q96R30 315 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 RASL12Q9NYN1 266 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 GREB1LQ9C091 1923 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 HSBP1L1C9JCN9 74 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 MT-ND4LP03901 98 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 CELA3AP09093 270 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PGA4P0DJD7 388 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 BMI1P35226 326 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 KIR3DL2P43630 455 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 AESQ08117 197 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 RPL7L1Q6DKI1 246 aaKnown RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 SLC25A47Q6Q0C1 308 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 TMEM91Q6ZNR0 172 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 NAA60Q9H7X0 242 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 KPTNQ9Y664 436 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 IGLV1-36A0A0B4J1U3 117 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF485Q8NCK3 441 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
SYNE1-204ENST00000367248 RPL31P62899 125 aaKnown RBP10.09□□□□□ -0.79
SYNE1-204ENST00000367248 MMDQ15546 238 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 PXDC1Q5TGL8 231 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 BLNKQ8WV28 456 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 SIRT7Q9NRC8 400 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 OR2B8PP59922 312 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 NANOS3P60323 173 aaKnown RBP10.09□□□□□ -0.79
SYNE1-204ENST00000367248 NKX2-6A6NCS4 301 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 IGF2P01344 180 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF260Q3ZCT1 412 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF658BQ4V348 819 aaPredicted RBP10.09□□□□□ -0.79
SYNE1-204ENST00000367248 TMEM123Q8N131 208 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 ITLN1Q8WWA0 313 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 RBM14Q96PK6 669 aaKnown RBP10.09□□□□□ -0.79
SYNE1-204ENST00000367248 AKAP6Q13023 2319 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 ANKRD20A5PA0PJZ0 165 aa10.09□□□□□ -0.79
SYNE1-204ENST00000367248 CTSDP07339 412 aaPredicted RBP10.09□□□□□ -0.79
SYNE1-204ENST00000367248 IGKV1D-42A0A075B6H8 117 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 OR2J3O76001 311 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 GABRA6Q16445 453 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 UNQ6494/PRO21346Q6UXR6 183 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 RAB18Q9NP72 206 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 SLC35D1Q9NTN3 355 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 OR13C7P0DN81 318 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 UCP2P55851 309 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 LYZP61626 148 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 TIGITQ495A1 244 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 TGIF2LYQ8IUE0 185 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 TGIF2LXQ8IUE1 241 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 UBE2L5PA0A1B0GUS4 154 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 C17orf51A8MQB3 221 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 SLC31A2O15432 143 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 SEMA7AO75326 666 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 CYB5R3P00387 301 aaPredicted RBP10.08□□□□□ -0.8
SYNE1-204ENST00000367248 CD37P11049 281 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 PMELP40967 661 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 ZNF826PQ6ZT77 177 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 RBPMSQ93062 196 aaKnown RBP10.08□□□□□ -0.8
SYNE1-204ENST00000367248 CA10Q9NS85 328 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 ST6GALNAC2Q9UJ37 374 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 SCN2AQ99250 2005 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 ORM2P19652 201 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 ARF6P62330 175 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 ROM1Q03395 351 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 MRPL14Q6P1L8 145 aaKnown RBP10.08□□□□□ -0.8
SYNE1-204ENST00000367248 MUC20Q8N307 709 aaPredicted RBP10.08□□□□□ -0.8
SYNE1-204ENST00000367248 VSTM2AQ8TAG5 236 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 DIRC2Q96SL1 478 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 CBR1P16152 277 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 FGF7P21781 194 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 RAB40CQ96S21 281 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 AMELYQ99218 206 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 CACNG5Q9UF02 275 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 SIPA1L1O43166 1804 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 TRDCB7Z8K6 153 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 MS4A18H0YCH9 400 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 CD1AP06126 327 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 GFRA1P56159 465 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms