RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 DPPA5A6NC42 116 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 NCBP2LA6PVI3 153 aaKnown RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 C12orf77C9JDV5 145 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 J3QR06 171 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SIRPB1O00241 398 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 GSTA4O15217 222 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SRSF10O75494 262 aaKnown RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 DHRS3O75911 302 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SOX14O95416 240 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 GASTP01350 101 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGLV1-51P01701 117 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 TTRP02766 147 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 LYNP07948 512 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 ALOX5APP20292 161 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 NFYBP25208 207 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 REG1BP48304 166 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 NUDT2P50583 147 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 PRRX1P54821 245 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 F2RL1P55085 397 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 KPNB1Q14974 876 aaKnown RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 NDUFA5Q16718 116 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 CLVS2Q5SYC1 327 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 C8orf82Q6P1X6 216 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SHFQ7M4L6 423 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 CROCCP3Q8IVE0 287 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SGPP2Q8IWX5 399 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 IQCF1Q8N6M8 205 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR52L1Q8NGH7 329 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 CASTOR1Q8WTX7 329 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 CREB3L1Q96BA8 519 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 Q96M66 194 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 ST6GALNAC5Q9BVH7 336 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 PPIL3Q9H2H8 161 aaKnown RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 GAL3ST2Q9H3Q3 398 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SEBOXQ9HB31 216 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 SAR1AQ9NR31 198 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 LIN7CQ9NUP9 197 aaKnown RBP6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 FGFR1OP2Q9NVK5 253 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 ING3Q9NXR8 418 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 TAS2R3Q9NYW6 316 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 VSIG4Q9Y279 399 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 WSB1Q9Y6I7 421 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A0G2JND7 137 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 TMEM269A0A1B0GVZ9 245 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 ODAMA1E959 279 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 BBIP1A8MTZ0 92 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 DLGAP1O14490 977 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 HSPA12AO43301 675 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 SOX15O60248 233 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 ENTPD6O75354 484 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 HTR3BO95264 441 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGF1P05019 195 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 ATP6V1B1P15313 513 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 BCL3P20749 454 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 RRM2P31350 389 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 ISL1P61371 349 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 SF3A3Q12874 501 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 UBE2V2Q15819 145 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 SLC25A26Q70HW3 274 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 COMMD2Q86X83 199 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 CCDC197Q8NCU1 140 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 TMEM104Q8NE00 496 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR14K1Q8NGZ2 314 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR9G1Q8NH87 305 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 EMG1Q92979 244 aaKnown RBP6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 NR1H4Q96RI1 486 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 S1PR3Q99500 378 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 GON7Q9BXV9 100 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 TTTY10Q9BZA0 68 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 TOLLIPQ9H0E2 274 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 GID8Q9NWU2 228 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 PSG11Q9UQ72 335 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 V9GYS6 101 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 KIAA2026Q5HYC2 2103 aa6.47□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGHV1-3A0A0C4DH29 117 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 IZUMO1RA6ND01 250 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 FAM90A10PA6NDY2 464 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 ACOD1A6NK06 481 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 MAGEB4O15481 346 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR2H2O95918 312 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR8U9P0C7N5 309 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 VDAC1P21796 283 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 PTGFRP43088 359 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 GNG10P50151 68 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 RAB9AP51151 201 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 BLVRAP53004 296 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZP1P60852 638 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 PPP1R8Q12972 351 aaKnown RBP6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 LSAMPQ13449 338 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 MADCAM1Q13477 382 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 PMS2P11Q13670 270 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZNF146Q15072 292 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 RCN1Q15293 331 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 LCN1P1Q5VSP4 162 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 SLX4IPQ5VYV7 408 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 METTL21CQ5VZV1 264 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 IL34Q6ZMJ4 242 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 Q6ZSR3 168 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms