RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KPTNQ9Y664 436 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 FN1P02751 2386 aaKnown RBP1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 M0QXV9 152 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CECR9P0C854 216 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CPMP14384 443 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 MSR1P21757 451 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CRABP1P29762 137 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 RAB25P57735 213 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CEACAM21Q3KPI0 293 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 ZCWPW2Q504Y3 356 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 PIP5KL1Q5T9C9 394 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 RBM45Q8IUH3 476 aaKnown RBP1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 TCAIMQ8N3R3 496 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CLHC1Q8NHS4 586 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 DCANP1Q8TF63 244 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 BLNKQ8WV28 456 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CMBLQ96DG6 245 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 CHID1Q9BWS9 393 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 IL22Q9GZX6 179 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 WDR55Q9H6Y2 383 aaPredicted RBP1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 RGS12O14924 1447 aa1.04□□□□□ -2.24
RNU4-28P-201ENST00000364739 MALRD1Q5VYJ5 2156 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 A0A0J9YX75 114 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 LOC102725191A0A1B0GVB3 256 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 A0A1B0GXF2 115 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 ANKRD20A5PA0PJZ0 165 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 TVP23AA6NH52 213 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 TRIM64CA6NLI5 447 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 SEC14L6B5MCN3 397 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 K7EN84 100 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 ALOX12BO75342 701 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 BCAP31P51572 246 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 XKP51811 444 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 CLDN8P56748 225 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 GBE1Q04446 702 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 TAL2Q16559 108 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 CYP4Z1Q86W10 505 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 CA13Q8N1Q1 262 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 REEP6Q96HR9 211 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 SLC25A31Q9H0C2 315 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 BTRCQ9Y297 605 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 ATRNO75882 1429 aa1.03□□□□□ -2.24
RNU4-28P-201ENST00000364739 A0A1W2PRG6 482 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 PXDNLA1KZ92 1463 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 VPS37CA5D8V6 355 aaPredicted RBP1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 POLR3AO14802 1390 aaPredicted RBP1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 SLC25A20O43772 301 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 MYO1DO94832 1006 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 IGKV5-2P06315 115 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 RALBP11234 206 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 ZNF7P17097 686 aaPredicted RBP1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 PSMC5P62195 406 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 N4BP2L1Q5TBK1 243 aaPredicted RBP1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 FAM43BQ6ZT52 329 aaPredicted RBP1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 BBOF1Q8ND07 529 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 OR5T3Q8NGG3 340 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 ZNF563Q8TA94 476 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 NRCAMQ92823 1304 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 CAPZA3Q96KX2 299 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 LZTFL1Q9NQ48 299 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 MINOS1-NBL1R4GNA1 71 aa1.02□□□□□ -2.25
RNU4-28P-201ENST00000364739 CRB1P82279 1406 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 TRAV8-3A0A0A6YYJ7 113 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 A0A0G2JQZ4 141 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 IGSF23A1L1A6 192 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 SIGLEC16A6NMB1 481 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 CALRP27797 417 aaKnown RBP1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 ELK4P28324 431 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 GPR4P46093 362 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 DAOAP59103 153 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 FAM229BQ4G0N7 80 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 DEFB119Q8N690 84 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 KCTD4Q8WVF5 259 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 KIAA1143Q96AT1 154 aaPredicted RBP1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 BLZF1Q9H2G9 400 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 CHRAC1Q9NRG0 131 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 ATAD5Q96QE3 1844 aa1.01□□□□□ -2.25
RNU4-28P-201ENST00000364739 PTPRKQ15262 1439 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 A0A1B0GTQ1 180 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 PGPA6NDG6 321 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 SOX14O95416 240 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 LYNX1P0DP58 116 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 PLTPP55058 493 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 TSPAN31Q12999 210 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 KRTCAP2Q8N6L1 136 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 PDCD6IPQ8WUM4 868 aaKnown RBP1□□□□□ -2.25
RNU4-28P-201ENST00000364739 PEF1Q9UBV8 284 aaKnown RBP1□□□□□ -2.25
RNU4-28P-201ENST00000364739 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
RNU4-28P-201ENST00000364739 CCDC88CQ9P219 2028 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 ARGFXA6NJG6 315 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 GATCO43716 136 aaKnown RBP0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 ENSAO43768 121 aaKnown RBP0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 ANGP03950 147 aaKnown RBP0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 MMDQ15546 238 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 GOLGA7BQ2TAP0 167 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 ASCL4Q6XD76 172 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 TMCO2Q7Z6W1 182 aaPredicted RBP0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 NIT1Q86X76 327 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 CACNG8Q8WXS5 425 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 UTP23Q9BRU9 249 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms