RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SLC6A1P30531 599 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 CDKN2AP42771 156 aaKnown RBP9.62□□□□□ -0.87
CLIP1-203ENST00000361654 PDZK1IP1Q13113 114 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 TEX30Q5JUR7 227 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 SLC23A3Q6PIS1 610 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 SLC52A3Q9NQ40 469 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 C20orf141Q9NUB4 165 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 TJP1Q07157 1748 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 A0A1W2PQF6 199 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 K7N7A8 449 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 C19orf57Q0VDD7 668 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 SLC25A35Q3KQZ1 300 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 AMER3Q8N944 861 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF230Q9UIE0 474 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM272A0A1B0GTI8 110 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 J3KRW8 73 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 NUBP1P53384 320 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 IL13RA2Q14627 380 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 ADAMTS17Q8TE56 1095 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF501Q96CX3 271 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF385DQ9H6B1 395 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 DCAF16Q9NXF7 216 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 IGSF23A1L1A6 192 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 SYNGR1O43759 233 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 SFT2D2O95562 160 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 GALP22466 123 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 RIMKLAQ8IXN7 391 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 IL19Q9UHD0 177 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 STARD10Q9Y365 291 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 PLAURQ03405 335 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 CENPVQ7Z7K6 275 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-203ENST00000361654 ATG4DQ86TL0 474 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-203ENST00000361654 DDX60Q8IY21 1712 aaKnown RBP9.61□□□□□ -0.87
CLIP1-203ENST00000361654 LEUTXA8MZ59 168 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 MGST3O14880 152 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 BCL2L11O43521 198 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 PRDX2P32119 198 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 PCSK4Q6UW60 755 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SLIRPQ9GZT3 109 aaKnown RBP9.61□□□□□ -0.87
CLIP1-203ENST00000361654 TUBA4BQ9H853 241 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SPINT1O43278 529 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 CHST1O43916 411 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 CST4P01036 141 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 MGPP08493 103 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 GUCA2AQ02747 115 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 RIGQ13278 110 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SPNS2Q8IVW8 549 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SLC26A10Q8NG04 563 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 OR10G4Q8NGN3 311 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 MOGAT1Q96PD6 335 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 WDR13Q9H1Z4 485 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 NAT8BQ9UHF3 227 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SPTA1P02549 2419 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 MAST2Q6P0Q8 1798 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 NHSQ6T4R5 1651 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 IGHV3OR15-7A0A075B7D8 119 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 UBE2L6O14933 153 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 BCL3P20749 454 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 LRRC75BQ2VPJ9 315 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 Q6ZN92 141 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 ZBTB44Q8NCP5 570 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 OR5C1Q8NGR4 320 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 METTL26Q96S19 204 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 KCNK15Q9H427 330 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 MMP24Q9Y5R2 645 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 HLXQ14774 488 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-203ENST00000361654 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 SPINK9Q5DT21 86 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 C10orf113Q5VZT2 155 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 MRPL22Q9NWU5 206 aaKnown RBP9.61□□□□□ -0.87
CLIP1-203ENST00000361654 ELOVL5Q9NYP7 299 aa9.61□□□□□ -0.87
CLIP1-203ENST00000361654 NPIPB6E9PJ23 425 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RAB29O14966 203 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 ZFPL1O95159 310 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 CPN1P15169 458 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 KRTDAPP60985 99 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RANP62826 216 aaKnown RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 IL24Q13007 206 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 CXorf66Q5JRM2 361 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 GCSAMQ8N6F7 178 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 OR4X1Q8NH49 305 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 OR2J1Q9GZK6 312 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RNF122Q9H9V4 155 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 KLK11Q9UBX7 282 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 FLVCR2Q9UPI3 526 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 KIF13AQ9H1H9 1805 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 MFSD2BA6NFX1 497 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 FXYD1O00168 92 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 PLPP2O43688 288 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms