RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 SLC7A11Q9UPY5 501 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 C9orf170A2RU37 121 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 CA11O75493 328 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 PMP2P02689 132 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 PGAM2P15259 253 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 CPT2P23786 658 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 TIMP3P35625 211 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 RAB5BP61020 215 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 CLINT1Q14677 625 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 DMRTC1Q5HYR2 192 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 POM121L2Q96KW2 1035 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 OCSTAMPQ9BR26 566 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 IL18BPO95998 194 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM225BP0DP42 221 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 MALLQ13021 153 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 PPA1Q15181 289 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 SPAG16Q8N0X2 631 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 STARD4Q96DR4 205 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 TLNRD1Q9H1K6 362 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 OPN3Q9H1Y3 402 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 OPA3Q9H6K4 179 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 ESPL1Q14674 2120 aa11.9□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A0G2JNJ9 132 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 FAM230AA0A1W2PPH8 454 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 C5orf49A4QMS7 147 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 ZNF503-AS2A6NEH8 195 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 SLC25A4P12235 298 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 SERPINA2P20848 420 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 TLE1Q04724 770 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 ZNF345Q14585 488 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 ACTBL2Q562R1 376 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 SLC25A42Q86VD7 318 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 INO80EQ8NBZ0 244 aaPredicted RBP11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 BHLHE23Q8NDY6 225 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 ARHGAP5-AS1Q96IT6 56 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 FN3KRPQ9HA64 309 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 Q9UFV3 132 aa11.9□□□□□ -0.51
CSNK1E-201ENST00000359867 BMP5P22003 454 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 MARCH1Q8TCQ1 289 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 DCUN1D4Q92564 292 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 MARS2Q96GW9 593 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 NEU1Q99519 415 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 RSRP1Q9BUV0 290 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 GGACTQ9BVM4 153 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 ELL3Q9HB65 397 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 IL36GQ9NZH8 169 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 CHD6Q8TD26 2715 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 COLCA2A8K830 154 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 SERPINE3A8MV23 424 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 PI3P19957 117 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 BLVRBP30043 206 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 SERPINF1P36955 418 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 ZNF610Q8N9Z0 462 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 ASB13Q8WXK3 278 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 Q96M66 194 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 PHB2Q99623 299 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 SSX3Q99909 188 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 PECRQ9BY49 303 aa11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-201ENST00000359867 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 IGKV1-27A0A075B6S5 117 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CXorf65A6NEN9 183 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CNOT4O95628 575 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CSTBP04080 98 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CCNOP22674 350 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 APLNRP35414 380 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CA7P43166 264 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 RSU1Q15404 277 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 TMEM200AQ86VY9 491 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 TMED6Q8WW62 240 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 PIGCQ92535 297 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 RTTNQ86VV8 2226 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CGAP01215 116 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 OR8U8P0C7N1 319 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 BLOC1S1P78537 153 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 TGFBR3Q03167 851 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 ARFRP1Q13795 201 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 LPCAT3Q6P1A2 487 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 ZDHHC22Q8N966 263 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 PROCRQ9UNN8 238 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 MEMO1Q9Y316 297 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 HIVEP3Q5T1R4 2406 aa11.88□□□□□ -0.51
CSNK1E-201ENST00000359867 C1orf196B1AJZ1 125 aa11.87□□□□□ -0.51
CSNK1E-201ENST00000359867 CCL21O00585 134 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms