RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ANGPTL4Q9BY76 406 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 ANKRD36CQ5JPF3 1778 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 SLC35B1P78383 322 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 LSMEM1Q8N8F7 131 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 OR4S2Q8NH73 311 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 ZNF502Q8TBZ5 544 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 MARVELD1Q9BSK0 173 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 OR2J1Q9GZK6 312 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 SYNGR2O43760 224 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 IGLV3-25P01717 112 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 MRPL24Q96A35 216 aaKnown RBP14.16□□□□□ -0.14
COL18A1-203ENST00000359759 FAHD2AQ96GK7 314 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 ST6GAL2Q96JF0 529 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 LAMA4Q16363 1823 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 DIRC3C9JPN6 131 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 PNRC1Q12796 327 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-203ENST00000359759 OR5R1Q8NH85 324 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 CTLA4P16410 223 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 MRPS11P82912 194 aaKnown RBP14.16□□□□□ -0.14
COL18A1-203ENST00000359759 JMJD6Q6NYC1 403 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-203ENST00000359759 SLC23A3Q6PIS1 610 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 IGHV5-51A0A0C4DH38 117 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 MFSD2BA6NFX1 497 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 PCMT1P22061 227 aa14.16□□□□□ -0.14
COL18A1-203ENST00000359759 TRAV39A0A0B4J263 110 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 ASB10Q8WXI3 467 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 RASL11BQ9BPW5 248 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 SCN11AQ9UI33 1791 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 DHRS7CA6NNS2 312 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 FOXO1Q12778 655 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 Q6ZNB5 142 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 CCL28Q9NRJ3 127 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 SIGLEC5O15389 551 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 SIGLEC14Q08ET2 396 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 CRYABP02511 175 aaKnown RBP14.15□□□□□ -0.14
COL18A1-203ENST00000359759 BTF3P20290 206 aaKnown RBP14.15□□□□□ -0.14
COL18A1-203ENST00000359759 PMELP40967 661 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 EWSR1Q01844 656 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■■ 30.4
COL18A1-203ENST00000359759 ZNF256Q9Y2P7 627 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-203ENST00000359759 R4GN57 208 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 KLF7O75840 302 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-203ENST00000359759 SPINK14Q6IE38 97 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 PET117Q6UWS5 81 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 FAM222BQ8WU58 562 aa14.15□□□□□ -0.14
COL18A1-203ENST00000359759 CDC42EP2O14613 210 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 ZNF324O75467 553 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 RCC1P18754 421 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 HINT1P49773 126 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 SLC25A30Q5SVS4 291 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 MRGPRFQ96AM1 343 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 MRM2Q9UI43 246 aaKnown RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 HAND1O96004 215 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 CD82P27701 267 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 CD226Q15762 336 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 DNLZQ5SXM8 178 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 RABAC1Q9UI14 185 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 NKX2-6A6NCS4 301 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 OOEPA6NGQ2 149 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 CTSDP07339 412 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 TMEM240Q5SV17 173 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 ZNF707Q96C28 371 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 LOC107984156A0A0G2JMH3 177 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 MMP9P14780 707 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 ZNF770Q6IQ21 691 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-203ENST00000359759 ARL17AQ8IVW1 177 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 GABRG3Q99928 467 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 FRRS1LQ9P0K9 344 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 CT62P0C5K7 136 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 GPR3P46089 330 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 PIGYQ3MUY2 71 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 SLC35E3Q7Z769 313 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 C9orf62Q8N4C0 152 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 PTX4Q96A99 478 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 NEU3Q9UQ49 428 aa14.14□□□□□ -0.15
COL18A1-203ENST00000359759 LGALSLQ3ZCW2 172 aaPredicted RBP14.13□□□□□ -0.15
COL18A1-203ENST00000359759 KHDC3LQ587J8 217 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 LYZL2Q7Z4W2 148 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 UBTD1Q9HAC8 227 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 NKX2-2O95096 273 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 SRFP11831 508 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 GBGT1Q8N5D6 347 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 RHOVQ96L33 236 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 CTSVO60911 334 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 PNLIPP16233 465 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 OR2I1PQ8NGU4 316 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 ZNF71Q9NQZ8 489 aaPredicted RBP14.13□□□□□ -0.15
COL18A1-203ENST00000359759 F2RL2O00254 374 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 OR4D9Q8NGE8 314 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 FSCN3Q9NQT6 498 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 CLN8Q9UBY8 286 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 V9GYH0 126 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 ISLRO14498 428 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 MOGAT3Q86VF5 341 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 RPS4Y2Q8TD47 263 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 SNRNP40Q96DI7 357 aaKnown RBP14.13□□□□□ -0.15
COL18A1-203ENST00000359759 RSG1Q9BU20 258 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 CRYBG1Q9Y4K1 1723 aa14.13□□□□□ -0.15
COL18A1-203ENST00000359759 SPTY2D1-AS1A0A0U1RR47 76 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms