RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ZNF880Q6PDB4 577 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 WDFY1Q8IWB7 410 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM234Q8WY98 164 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 P2RX4Q99571 388 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 PYGO2Q9BRQ0 406 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
UBAP1-202ENST00000359544 CHST11Q9NPF2 352 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 ATXN7O15265 892 aaPredicted RBP12.94□□□□□ -0.34
UBAP1-202ENST00000359544 BCL2P10415 239 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 PCP4P48539 62 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 UCP3P55916 312 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 THEM4Q5T1C6 240 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 KLHL13Q9P2N7 655 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 MYOTQ9UBF9 498 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 DYNLT3P51808 116 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 BIDP55957 195 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 GABREP78334 506 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 ZFP36L1Q07352 338 aaKnown RBP12.94□□□□□ -0.34
UBAP1-202ENST00000359544 FAM57BQ71RH2 274 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM123Q8N131 208 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 KLHDC7BQ96G42 594 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
UBAP1-202ENST00000359544 TRDCB7Z8K6 153 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 RPLP1P05386 114 aaKnown RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 PGA3P0DJD8 388 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 FCGR2AP12318 317 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 MMP9P14780 707 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 TAS2R30P59541 319 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 ANKRD39Q53RE8 183 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 MRPL41Q8IXM3 137 aaKnown RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF100Q8IYN0 542 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 NPRL2Q8WTW4 380 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 CBLN4Q9NTU7 201 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM210A6NLX4 147 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 ETV2O00321 342 aaPredicted RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 SSSCA1O60232 199 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 ONECUT2O95948 504 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 OR4A8P0C604 315 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 MTCP1P56278 107 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 NXPH1P58417 271 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 GRB2P62993 217 aaKnown RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 SHBQ15464 509 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 C1orf194Q5T5A4 169 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 CRIP3Q6Q6R5 217 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF66Q6ZN08 573 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 CPEB2Q7Z5Q1 589 aaKnown RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 METTL27Q8N6F8 245 aaPredicted RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 DEFB124Q8NES8 71 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 Q96M66 194 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 ATP5SQ99766 215 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
UBAP1-202ENST00000359544 PTRH2Q9Y3E5 179 aaKnown RBP12.93□□□□□ -0.34
UBAP1-202ENST00000359544 NKX2-6A6NCS4 301 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 MSTNO14793 375 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 IGKV3-11P04433 115 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 FAM3BP58499 235 aaPredicted RBP12.92□□□□□ -0.34
UBAP1-202ENST00000359544 RUNX1Q01196 453 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 PMS2P11Q13670 270 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 MEX3BQ6ZN04 569 aaKnown RBP12.92□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM170AQ8WVE7 144 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 PP6455Q8WZ26 134 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 MOB3AQ96BX8 217 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 GPR173Q9NS66 373 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 PHF3Q92576 2039 aaKnown RBP12.92□□□□□ -0.34
UBAP1-202ENST00000359544 ARID1BQ8NFD5 2236 aaPredicted RBP12.92□□□□□ -0.34
UBAP1-202ENST00000359544 KIR2DS5A0A0G2JLQ3 304 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 KIR2DL5BA0A0G2JN68 375 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 A0A0G2JNG1 304 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 KIR2DL5BA0A0G2JPC4 375 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 FAM221AA4D161 298 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM150CB9EJG8 249 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 KIR2DS3K7RE56 304 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 GLI4P10075 376 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 FGF5P12034 268 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 MYF5P13349 255 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 CLRN1P58418 232 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 CLN3Q13286 438 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 KIR2DS5Q14953 304 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
UBAP1-202ENST00000359544 THNSL2Q86YJ6 484 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 KIR2DL5AQ8N109 375 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 D2HGDHQ8N465 521 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF721Q8TF20 911 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 EMC6Q9BV81 110 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 LAMP3Q9UQV4 416 aa12.92□□□□□ -0.34
UBAP1-202ENST00000359544 ARID1AO14497 2285 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
UBAP1-202ENST00000359544 CST2P09228 141 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 CD59P13987 128 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 HERV-K104P61576 105 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 IL24Q13007 206 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 HERPUD1Q15011 391 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 P2RY6Q15077 328 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 NKAIN1Q4KMZ8 207 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms