RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SHEQ5VZ18 495 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 BRICD5Q6PL45 260 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 MUC15Q8N387 334 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 OR4D10Q8NGI6 311 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 OR51S1Q8NGJ8 323 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 OR56B4Q8NH76 319 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 LILRB1Q8NHL6 650 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 DYRK2Q92630 601 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 RDH5Q92781 318 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 HPS1Q92902 700 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 PRRT1Q99946 306 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 C20orf85Q9H1P6 137 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 RIMS4Q9H426 269 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF286AQ9HBT8 521 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 DECR2Q9NUI1 292 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 ETAA1Q9NY74 926 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 DNAJB11Q9UBS4 358 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 OR14J1Q9UGF5 321 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF230Q9UIE0 474 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 NPTNQ9Y639 398 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 TRAV6A0A075B6T7 132 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 A6NNC1 897 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 SLC33A1O00400 549 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 HS3ST1O14792 307 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 DHFRP00374 187 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 PMP2P02689 132 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 CSN2P05814 226 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 H2AFB2P0C5Z0 115 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 ZNF735P0CB33 412 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 EGR1P18146 543 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 OR3A3P47888 321 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 RAG2P55895 527 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 ARPC4P59998 168 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 MICBQ29980 383 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 VAX1Q5SQQ9 334 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 GCSAMQ8N6F7 178 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 BOLLQ8N9W6 283 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 MAFIPQ8WZ33 124 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 SLC6A7Q99884 636 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 GINS4Q9BRT9 223 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 WDR13Q9H1Z4 485 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 SAP30LQ9HAJ7 183 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 GCM1Q9NP62 436 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 SLC2A8Q9NY64 477 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 PPP1R3CQ9UQK1 317 aa11.64□□□□□ -0.55
PDLIM5-203ENST00000359265 FAM221AA4D161 298 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 LRRC30A6NM36 301 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 POM121CA8CG34 1229 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 H7C1Q1 480 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 IFNL4K9M1U5 179 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 NAPSAO96009 420 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 LMO1P25800 156 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 KCNJ3P48549 501 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 CCL8P80075 99 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 CDK10Q15131 360 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 SRSF7Q16629 238 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 SWI5Q1ZZU3 235 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 MST1LQ2TV78 715 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 IDO2Q6ZQW0 420 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 TMEM17Q86X19 198 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 ARRDC1Q8N5I2 433 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 OR5AP2Q8NGF4 316 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 SLC25A21Q9BQT8 299 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 PPA2Q9H2U2 334 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 SEBOXQ9HB31 216 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 TREM2Q9NZC2 230 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 EHFQ9NZC4 300 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
PDLIM5-203ENST00000359265 TRBV6-6A0A0A6YYG2 114 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 KIR2DS1A0A191URI9 304 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 ARPC1BO15143 372 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 PFDN1O60925 122 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 PEX14O75381 377 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 LHBP01229 141 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 CD80P33681 288 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 KIR2DS4P43632 304 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 CEBPDP49716 269 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 PPOXP50336 477 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 KIR2DS1Q14954 304 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 TATDN3Q17R31 274 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 Q6ZS49 121 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 MOB1BQ7L9L4 216 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 C1orf87Q8N0U7 546 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 CADM3Q8N126 398 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 GSX1Q9H4S2 264 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 Q9N2K0 584 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 DSCAMO60469 2012 aa11.62□□□□□ -0.55
PDLIM5-203ENST00000359265 IGKV1D-8A0A087WSZ0 117 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 RFPL4AA6NLU0 287 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 RFPL4AL1F8VTS6 287 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 PRAF2O60831 178 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 PSG2P11465 335 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 COX6B1P14854 86 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 RAB25P57735 213 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms