RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 OR5H1A6NKK0 313 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SELENOPP49908 381 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TRIP6Q15654 476 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 ZXDCQ2QGD7 858 aaPredicted RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 FBLIM1Q8WUP2 373 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 CHAC2Q8WUX2 184 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 HSD17B10Q99714 261 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 GPR35Q9HC97 309 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 MYO16Q9Y6X6 1858 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SOCS1O15524 211 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TOX4O94842 621 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 HNF1AP20823 631 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 MRPS11P82912 194 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM65Q6PI78 240 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 NFAM1Q8NET5 270 aaPredicted RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 VAMP8Q9BV40 100 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 ARL2-SNX15V9GYD0 113 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 ZFC3H1O60293 1989 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 ZNF785A8K8V0 405 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 GATCO43716 136 aaKnown RBP10.32□□□□□ -0.76
COL9A1-202ENST00000357250 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 BMP5P22003 454 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 ZNF79Q15937 498 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 RFESDQ8TAC1 157 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 FAM103A1Q9BTL3 118 aaKnown RBP10.32□□□□□ -0.76
COL9A1-202ENST00000357250 RAB1BQ9H0U4 201 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 ADAP1O75689 374 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 GABRA6Q16445 453 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 BTNL3Q6UXE8 466 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 ASCL5Q7RTU5 278 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 ZAR1Q86SH2 424 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 PARP11Q9NR21 331 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 LCTP09848 1927 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 PHOX2AO14813 284 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 ASAH2BP0C7U1 165 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 PEBP1P30086 187 aaKnown RBP10.32□□□□□ -0.76
COL9A1-202ENST00000357250 MNX1P50219 401 aaPredicted RBP10.32□□□□□ -0.76
COL9A1-202ENST00000357250 SULT1A1P50225 295 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 BSXQ3C1V8 233 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 VAX1Q5SQQ9 334 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 FAM27BQ5VT28 67 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.32□□□□□ -0.76
COL9A1-202ENST00000357250 ZNF721Q8TF20 911 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 SLC2A9Q9NRM0 540 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 OR1A1Q9P1Q5 309 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 PRNDQ9UKY0 176 aa10.32□□□□□ -0.76
COL9A1-202ENST00000357250 SP1P08047 785 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 S100A4P26447 101 aaKnown RBP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 LIMS1P48059 325 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 KRTDAPP60985 99 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 POLR2GP62487 172 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 HES3Q5TGS1 186 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 CXorf67Q86X51 503 aaPredicted RBP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 C9orf40Q8IXQ3 194 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 TCTEX1D1Q8N7M0 179 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 STXBP6Q8NFX7 210 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 OR2W1Q9Y3N9 320 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 CACNA1HO95180 2353 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 HRKO00198 91 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 SLC31A2O15432 143 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 SNCGO76070 127 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 MMP9P14780 707 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 ROM1Q03395 351 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 PDCD1Q15116 288 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 PLAC9Q5JTB6 97 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 CLEC9AQ6UXN8 241 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 MRGPRDQ8TDS7 321 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 R3HDM4Q96D70 268 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 GOLT1BQ9Y3E0 138 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 TRAV8-7A0A075B6U6 113 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 RPL36A-HNRNPH2H7BZ11 118 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 LYZL6O75951 148 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 MLF1P58340 268 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 ACSM6Q6P461 480 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 BHLHA15Q7RTS1 189 aaPredicted RBP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 PRSS27Q9BQR3 290 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 VAX2Q9UIW0 290 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 ZMIZ1Q9ULJ6 1067 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 IGHV5-10-1A0A0J9YXX1 117 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 HAND1O96004 215 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 CDX2Q99626 313 aaPredicted RBP10.31□□□□□ -0.76
COL9A1-202ENST00000357250 FAM117AQ9C073 453 aa10.31□□□□□ -0.76
COL9A1-202ENST00000357250 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 RBP4P02753 201 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 SIGLEC14Q08ET2 396 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 Q56UQ5 140 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 MRGPRGQ86SM5 289 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 GMPPAQ96IJ6 420 aaPredicted RBP10.3□□□□□ -0.76
COL9A1-202ENST00000357250 C1RLQ9NZP8 487 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 PILRAQ9UKJ1 303 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A10PA6NDY2 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A18PA6NE21 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A16PA6NEW6 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A20PA6NIJ5 464 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms