RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TOX4O94842 621 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 GTF2F2P13984 249 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF44P15621 663 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SRMP19623 302 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 GABRR1P24046 479 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 CALRP27797 417 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 FGF9P31371 208 aaPredicted RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PSMD7P51665 324 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 P2RX3P56373 397 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PAX5Q02548 391 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 NEDD8Q15843 81 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 RAB11BQ15907 218 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 KRTAP21-3Q3LHN1 58 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 TIMM50Q3ZCQ8 353 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PAN3Q58A45 887 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 KLF17Q5JT82 389 aaPredicted RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 GPR157Q5UAW9 335 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 C17orf107Q6ZR85 190 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 C1orf122Q6ZSJ8 110 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 GDPD3Q7L5L3 318 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 OR2W3Q7Z3T1 314 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 REC114Q7Z4M0 266 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 OR4S1Q8NGB4 309 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 OR4D6Q8NGJ1 314 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 OR10K1Q8NGX5 313 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 TMEM203Q969S6 136 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 C1orf147Q96MC9 270 aaPredicted RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 CST11Q9H112 138 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 NCOR1P1Q9H4R4 102 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 UNKLQ9H9P5 680 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ZMAT3Q9HA38 289 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SPACA1Q9HBV2 294 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 C19orf12Q9NSK7 152 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SSR3Q9UNL2 185 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 LINC00312Q9Y6C7 94 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 HIVEP2P31629 2446 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 VPS13CQ709C8 3753 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ACANP16112 2415 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 FN1P02751 2386 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 A0A0A6YYJ9 748 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 hCG_1809904A0A1W2PP81 198 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 A0A1W2PPE2 198 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 A0A1W2PR64 198 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 A0A1W2PRV1 198 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 hADV38S2A0JD32 116 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 DBX1A6NMT0 343 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 DEGS1O15121 323 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PSPNO60542 156 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 CDRT1O95170 752 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 GLAP06280 429 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SMIM18P0DKX4 95 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 CALCBP10092 127 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 MGMTP16455 207 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 HTR2CP28335 458 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 DUSP1P28562 367 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 DLX6P56179 175 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 EDDM3BP56851 147 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ERVFRD-1P60508 538 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 EDDM3AQ14507 147 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF273Q14593 569 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PIGYQ3MUY2 71 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SLC22A6Q4U2R8 563 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 TCF23Q7RTU1 214 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 VMO1Q7Z5L0 202 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 BPIFB2Q8N4F0 458 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 GFI1Q99684 422 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 NKX3-1Q99801 234 aaPredicted RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 MRPS26Q9BYN8 205 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PPIL3Q9H2H8 161 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 PPA2Q9H2U2 334 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 METTL8Q9H825 291 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 RCC2Q9P258 522 aaKnown RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 FBLN5Q9UBX5 448 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ST3GAL6Q9Y274 331 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 UBE2J1Q9Y385 318 aaPredicted RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 ARHGAP32A7KAX9 2087 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 TRAV24A0A0B4J272 114 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 IGHV1-69DA0A0B4J2H0 117 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 A0A0G2JK05 382 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 ODAMA1E959 279 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 TMEM14DPA8MWL7 114 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 CRTAPO75718 401 aaPredicted RBP3.25□□□□□ -1.89
CNOT4-202ENST00000356162 CLPXO76031 633 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 IGHV1-69P01742 117 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF728P0DKX0 622 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 CD36P16671 472 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 PRTN3P24158 256 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 FPR2P25090 351 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 ARF6P62330 175 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 C22orf42Q6IC83 251 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 USP43Q70EL4 1123 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 TPRA1Q86W33 373 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 THNSL2Q86YJ6 484 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 Q8N7P7 452 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 KCNG3Q8TAE7 436 aa3.25□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF418Q8TF45 676 aaPredicted RBP3.25□□□□□ -1.89
CNOT4-202ENST00000356162 CORO2AQ92828 525 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms