RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DSCAMO60469 2012 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 CSN2P05814 226 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 PLA2G2AP14555 144 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 OR3A3P47888 321 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 KCNJ3P48549 501 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ATXN7L3Q14CW9 347 aaPredicted RBP13.06□□□□□ -0.32
CTSA-202ENST00000354880 CHRFAM7AQ494W8 412 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 C17orf107Q6ZR85 190 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ASCC1Q8N9N2 400 aaKnown RBP13.06□□□□□ -0.32
CTSA-202ENST00000354880 PLPPR1Q8TBJ4 325 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 MRPL30Q8TCC3 161 aaKnown RBP13.06□□□□□ -0.32
CTSA-202ENST00000354880 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ANXA10Q9UJ72 324 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 NUBP2Q9Y5Y2 271 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
CTSA-202ENST00000354880 TRBV6-6A0A0A6YYG2 114 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 TMEM82A0PJX8 343 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 CLEC18AA5D8T8 446 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 H7C1Q1 480 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 IFNA6P05013 189 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ZNF735P0CB33 412 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ARPC4P59998 168 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 SRSF7Q16629 238 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTSA-202ENST00000354880 HFEQ30201 348 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 VAX1Q5SQQ9 334 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 STUMQ69YW2 141 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 CLEC18BQ6UXF7 455 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ZNF497Q6ZNH5 498 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 CLEC18CQ8NCF0 446 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 DEFB108BQ8NET1 73 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 CREB3L1Q96BA8 519 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 SLC6A7Q99884 636 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 Q9N2K0 584 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 NUDT15Q9NV35 164 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 SCP2D1Q9UJQ7 156 aa13.06□□□□□ -0.32
CTSA-202ENST00000354880 PPIAL4EA0A075B759 164 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 PPIAL4DF5H284 164 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 ZNF737O75373 536 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 CLDN1O95832 211 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 PPIAL4FP0DN26 164 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 OR3A1P47881 315 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 Q6ZS49 121 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 GAPTQ8N292 157 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 PRRT1Q99946 306 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 SHARPINQ9H0F6 387 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 PPIAL4AQ9Y536 164 aa13.05□□□□□ -0.32
CTSA-202ENST00000354880 TRAV6A0A075B6T7 132 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 J3QKU1 62 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 LGALS8O00214 317 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 TLE4Q04727 773 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 CDK10Q15131 360 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 ZMYND11Q15326 602 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 RBMS2Q15434 407 aaKnown RBP13.04□□□□□ -0.32
CTSA-202ENST00000354880 SCGB2B2Q4G0G5 96 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 RSBN1Q5VWQ0 802 aaPredicted RBP13.04□□□□□ -0.32
CTSA-202ENST00000354880 IDO2Q6ZQW0 420 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 OVCH2Q7RTZ1 564 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 ARRDC1Q8N5I2 433 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 NEU4Q8WWR8 484 aaPredicted RBP13.04□□□□□ -0.32
CTSA-202ENST00000354880 SDSLQ96GA7 329 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 SNX22Q96L94 193 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 EHFQ9NZC4 300 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 A1L4Q6 167 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 NDUFB6O95139 128 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 GYPAP02724 150 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 TSPAN5P62079 268 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 GRK1Q15835 563 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 SLC35E4Q6ICL7 350 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 ZNF880Q6PDB4 577 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 ZNF561Q8N587 486 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 ZNRF1Q8ND25 227 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 GINS4Q9BRT9 223 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 CLEC4MQ9H2X3 399 aaPredicted RBP13.04□□□□□ -0.32
CTSA-202ENST00000354880 MAB21L2Q9Y586 359 aa13.04□□□□□ -0.32
CTSA-202ENST00000354880 TENM4Q6N022 2769 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 TACC2O95359 2948 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 KIR2DS1A0A191URI9 304 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 TMEM30CPA0ZSE6 113 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 INMT-MINDY4F8WBC2 141 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 K7N7A8 449 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 SDCBPO00560 298 aaPredicted RBP13.03□□□□□ -0.32
CTSA-202ENST00000354880 GSTT2P0CG29 244 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 RCC1P18754 421 aaPredicted RBP13.03□□□□□ -0.32
CTSA-202ENST00000354880 COL8A2P25067 703 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 KIR2DS4P43632 304 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 AESQ08117 197 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 KIR2DS1Q14954 304 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 ZNF788Q6ZQV5 615 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 MOB1BQ7L9L4 216 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 TMEM17Q86X19 198 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 CCDC107Q8WV48 283 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms