RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 OR5AC1P0C628 307 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 GLI4P10075 376 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 B4GALT1P15291 398 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 MSR1P21757 451 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 ACKR3P25106 362 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 OPRM1P35372 400 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 UCP2P55851 309 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 LSM6P62312 80 aaKnown RBP7.4□□□□□ -1.23
TRIM55-204ENST00000353317 ARL6IP1Q15041 203 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 Q6ZS92 163 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 LYZL2Q7Z4W2 148 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 GJC3Q8NFK1 279 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 TOMM40LQ969M1 308 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 ULBP2Q9BZM5 246 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.23
TRIM55-204ENST00000353317 NELFAQ9H3P2 528 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 PLEKHA2Q9HB19 425 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 SPACA1Q9HBV2 294 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 ADGRG4Q8IZF6 3080 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 MED19A0JLT2 244 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 E5RGE8 158 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 K7ENP7 123 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 SGCEO43556 437 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 SEC11BP0C7V7 166 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 SMIM6P0DI80 62 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 PPA1Q15181 289 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 HMGN3Q15651 99 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 TAF9Q16594 264 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 CEACAM16Q2WEN9 425 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 SNAI3Q3KNW1 292 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 KRBOX4Q5JUW0 171 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 INO80CQ6PI98 192 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 ZADH2Q8N4Q0 377 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF561Q8N587 486 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 REEP6Q96HR9 211 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 SH3BGRL3Q9H299 93 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 RGCCQ9H4X1 137 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 GPR35Q9HC97 309 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 AK3Q9UIJ7 227 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 ZDHHC8Q9ULC8 765 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 NSG2Q9Y328 171 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 hCG_1809904A0A1W2PP81 198 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 A0A1W2PR64 198 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 A0A1W2PRV1 198 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF850A8MQ14 1090 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 M0R036 132 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 SPRY1O43609 319 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 OTX1P32242 354 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 GUCA1AP43080 201 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 MTCP1P56278 107 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 FABP9Q0Z7S8 132 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 TMEM187Q14656 261 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 TBR1Q16650 682 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 RTL6Q6ICC9 239 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 BRICD5Q6PL45 260 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 OR52M1Q8NGK5 317 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 RTN4IP1Q8WWV3 396 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 DYRK2Q92630 601 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 MARS2Q96GW9 593 aaKnown RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 TUBA4BQ9H853 241 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 BCO1Q9HAY6 547 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF71Q9NQZ8 489 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 PLSCR2Q9NRY7 297 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 GPR173Q9NS66 373 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 TP53TG5Q9Y2B4 290 aa7.39□□□□□ -1.23
TRIM55-204ENST00000353317 NOSIPQ9Y314 301 aaKnown RBP7.39□□□□□ -1.23
TRIM55-204ENST00000353317 M0R135 149 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 ARG1P05089 322 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 S100A8P05109 93 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 FABP1P07148 127 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 P2RY1P47900 373 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 PRSS12P56730 875 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 FXYD4P59646 89 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 NHLH2Q02577 135 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 Q6ZSR3 168 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 GCNT2Q8N0V5 402 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 FAM24BQ8N5W8 94 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 HPSE2Q8WWQ2 592 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 GALNT14Q96FL9 552 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF799Q96GE5 643 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 GINS3Q9BRX5 216 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 PRDM14Q9GZV8 571 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 SEBOXQ9HB31 216 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-204ENST00000353317 GSN-AS1Q9NRJ2 163 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 TMEM38BQ9NVV0 291 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 KCNIP3Q9Y2W7 256 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 IGKV1-27A0A075B6S5 117 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 C1QTNF9BB2RNN3 333 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 UMAD1C9J7I0 102 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 MRPL33O75394 65 aaKnown RBP7.38□□□□□ -1.23
TRIM55-204ENST00000353317 C1QTNF9P0C862 333 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF728P0DKX0 622 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF14P17017 642 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-204ENST00000353317 RAB5AP20339 215 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 LMO1P25800 156 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 GLP1RP43220 463 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms