RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 MFSD2BA6NFX1 497 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 HS3ST1O14792 307 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 CTXN2P0C2S0 81 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 FOXC1Q12948 553 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 CXorf67Q86X51 503 aaPredicted RBP17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF610Q8N9Z0 462 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 STOML3Q8TAV4 291 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 MRPL30Q8TCC3 161 aaKnown RBP17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 RDH5Q92781 318 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 SDHAF2Q9NX18 166 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 GTF3C1Q12789 2109 aa17.32■□□□□ 0.36
CHRNA3-202ENST00000348639 S100A10P60903 97 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 ERVK11-1P61568 191 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 HERPUD1Q15011 391 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 P2RY6Q15077 328 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 UNQ6126/PRO20091Q6UXV3 157 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 LIAT1Q6ZQX7 453 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 SEM1Q6ZVN7 128 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 FAM185AQ8N0U4 392 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 RBMXL3Q8N7X1 1067 aaKnown RBP17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 RELL2Q8NC24 303 aaPredicted RBP17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 OR11L1Q8NGX0 322 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 OPN3Q9H1Y3 402 aaPredicted RBP17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 OBP2BQ9NPH6 170 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF71Q9NQZ8 489 aaPredicted RBP17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 PFDN2Q9UHV9 154 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 DEGS1O15121 323 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 BET1O15155 118 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 TUBG1P23258 451 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 MPV17P39210 176 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF154Q13106 437 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 Q6P435 159 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 GLYATL2Q8WU03 294 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 MSI2Q96DH6 328 aaKnown RBP17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 C18orf12Q96KH6 178 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 CNTNAP3BQ96NU0 1288 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 CNTNAP3Q9BZ76 1288 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 TUBG2Q9NRH3 451 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 ESPL1Q14674 2120 aa17.31■□□□□ 0.36
CHRNA3-202ENST00000348639 MSGN1A6NI15 193 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 IGLV1-44P01699 117 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 GNRHRP30968 328 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 KCNJ3P48549 501 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 NAAAQ02083 359 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF880Q6PDB4 577 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 C20orf204Q6ZNR8 217 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 C5orf24Q7Z6I8 188 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 CCDC28AQ8IWP9 274 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 SHARPINQ9H0F6 387 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 TMEM210A6NLX4 147 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 C3orf80F5H4A9 247 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 MPPED1O15442 326 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 TUSC2O75896 110 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 CECR9P0C854 216 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF44P15621 663 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF250P15622 560 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 OR8G1Q15617 311 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 LGI3Q8N145 548 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 NRIP2Q9BQI9 281 aa17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 INTS1Q8N201 2190 aaKnown RBP17.3■□□□□ 0.36
CHRNA3-202ENST00000348639 DMXL2Q8TDJ6 3036 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 IGKV1-6A0A0C4DH72 117 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 SHOXO15266 292 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 PGA5P0DJD9 388 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 SNTB1Q13884 538 aaKnown RBP17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 PAN3Q58A45 887 aaKnown RBP17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 FAM74A1Q5RGS3 127 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 LDLRAD3Q86YD5 345 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 FAM219AQ8IW50 185 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 CYTL1Q9NRR1 136 aa17.29■□□□□ 0.36
CHRNA3-202ENST00000348639 A0A1B0GW55 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 H7C1Q1 480 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 CDIPTO14735 213 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 PHF1O43189 567 aaPredicted RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4L2P0CJ85 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4L3P0CJ86 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4L4P0CJ87 422 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4L5P0CJ88 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4L6P0CJ89 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4L7P0CJ90 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 TPT1P13693 172 aaKnown RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 RND3P61587 244 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 BEND4Q6ZU67 534 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 BHLHA15Q7RTS1 189 aaPredicted RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 LYZL2Q7Z4W2 148 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 OR8G5Q8NG78 346 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 TMEM100Q9NV29 134 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 TREM2Q9NZC2 230 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DUX4Q9UBX2 424 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 PURGQ9UJV8 347 aaKnown RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 DEDDO75618 318 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 ACAA1P09110 424 aaPredicted RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 MDH2P40926 338 aaKnown RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF565Q8N9K5 539 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 OR4A4PQ8NGN8 299 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 BCL2L14Q9BZR8 327 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 FBXO9Q9UK97 447 aaPredicted RBP17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 PCDHB10Q9UN67 800 aa17.28■□□□□ 0.36
CHRNA3-202ENST00000348639 ATMQ13315 3056 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 IGHV3-64DA0A0J9YX35 117 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms