RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 SUMF1Q8NBK3 374 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 SIGLEC12Q96PQ1 595 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 GABRG3Q99928 467 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 Q9N2K0 584 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 ARID1BQ8NFD5 2236 aaPredicted RBP13.55□□□□□ -0.24
LRP8-202ENST00000347547 PCNX3Q9H6A9 2034 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 SPTBN5Q9NRC6 3674 aaKnown RBP13.55□□□□□ -0.24
LRP8-202ENST00000347547 EYSQ5T1H1 3165 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 SHISA7A6NL88 538 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 ZFP92A6NM28 416 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 ZNF205O95201 554 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 TYMSP04818 313 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 FAHP16930 419 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 TNFRSF4P43489 277 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 MFAP5Q13361 173 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 NCR3LG1Q68D85 454 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 THNSL2Q86YJ6 484 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 MRPL41Q8IXM3 137 aaKnown RBP13.54□□□□□ -0.24
LRP8-202ENST00000347547 SELENOHQ8IZQ5 122 aaKnown RBP13.54□□□□□ -0.24
LRP8-202ENST00000347547 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 POLR3KQ9Y2Y1 108 aaPredicted RBP13.54□□□□□ -0.24
LRP8-202ENST00000347547 TP53I11O14683 189 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 CST2P09228 141 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 GZMHP20718 246 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 COL9A1P20849 921 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 AADACP22760 399 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 PCP4P48539 62 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 HNRNPKP61978 463 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■□ 26.6
LRP8-202ENST00000347547 DLX2Q07687 328 aaPredicted RBP13.54□□□□□ -0.24
LRP8-202ENST00000347547 NMSQ5H8A3 153 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 ZNF695Q8IW36 515 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 UEVLDQ8IX04 471 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 PLPPR1Q8TBJ4 325 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 PIGTQ969N2 578 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 RPP25Q9BUL9 199 aaKnown RBP13.54□□□□□ -0.24
LRP8-202ENST00000347547 BRWD1Q9NSI6 2320 aa13.54□□□□□ -0.24
LRP8-202ENST00000347547 KLF8O95600 359 aaPredicted RBP13.53□□□□□ -0.24
LRP8-202ENST00000347547 IFNA5P01569 189 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 NTSR1P30989 418 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 ZNF154Q13106 437 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 ZNF774Q6NX45 483 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 BTNL3Q6UXE8 466 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 NUDT22Q9BRQ3 303 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 RPRMQ9NS64 109 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 FKBP11Q9NYL4 201 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 ADAMTS9Q9P2N4 1935 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 ADAM20O43506 726 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 SOX15O60248 233 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 PIAS2O75928 621 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 HRASP01112 189 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 IFNA1P01562 189 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 GALR1P47211 349 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 OR3A1P47881 315 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 PAX9P55771 341 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 HIST3H3Q16695 136 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 ASCL4Q6XD76 172 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 SPSB1Q96BD6 273 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 PSMG3Q9BT73 122 aaPredicted RBP13.53□□□□□ -0.24
LRP8-202ENST00000347547 PIGLQ9Y2B2 252 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
LRP8-202ENST00000347547 F5P12259 2224 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 PPYP01298 95 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 CELA2BP08218 269 aaPredicted RBP13.52□□□□□ -0.24
LRP8-202ENST00000347547 NPSP0C0P6 89 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 UCP1P25874 307 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 OR10J1P30954 320 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 MRPS11P82912 194 aaKnown RBP13.52□□□□□ -0.24
LRP8-202ENST00000347547 ZNF726P1Q15940 193 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 TMEM241Q24JQ0 296 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 Q6ZSR6 202 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 PRR18Q8N4B5 295 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 CISD2Q8N5K1 135 aaKnown RBP13.52□□□□□ -0.24
LRP8-202ENST00000347547 OR1N1Q8NGS0 311 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 COPS7AQ9UBW8 275 aa13.52□□□□□ -0.24
LRP8-202ENST00000347547 UBE2J1Q9Y385 318 aaPredicted RBP13.52□□□□□ -0.24
LRP8-202ENST00000347547 A0A1W2PQF6 199 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 VSTM2BA6NLU5 285 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 H7BYZ3 331 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 TRAF3IP2O43734 574 aaPredicted RBP13.52□□□□□ -0.25
LRP8-202ENST00000347547 KBTBD11O94819 623 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 C21orf62-AS1Q17RA5 79 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 BSXQ3C1V8 233 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 PARM1Q6UWI2 310 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 C17orf78Q8N4C9 275 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 ZNF160Q9HCG1 818 aa13.52□□□□□ -0.25
LRP8-202ENST00000347547 CHST1O43916 411 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 VDAC1P21796 283 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 C17orf67Q0P5P2 114 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 ADIRFQ15847 76 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 TMEM31Q5JXX7 168 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 DTX1Q86Y01 620 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 IMMP2LQ96T52 175 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 SMIM7Q9BQ49 75 aa13.51□□□□□ -0.25
LRP8-202ENST00000347547 OR6C3Q9NZP0 311 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms