RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 P2RY4P51582 365 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 OR1C1Q15619 314 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 ANKRD55Q3KP44 614 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 SMIM12Q96EX1 92 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 DYNLRB1Q9NP97 96 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 CCL28Q9NRJ3 127 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 TMEM167BQ9NRX6 74 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 TECRQ9NZ01 308 aaKnown RBP10.66□□□□□ -0.7
COL12A1-202ENST00000345356 CTSVO60911 334 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 PRSS1P07477 247 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 METAP1P53582 386 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 ISXQ2M1V0 245 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 ZBP1Q9H171 429 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 LRRC75AQ8NAA5 344 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 RSG1Q9BU20 258 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 CES1P1Q9UKY3 287 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 ASCC3Q8N3C0 2202 aaKnown RBP10.66□□□□□ -0.7
COL12A1-202ENST00000345356 HELTA6NFD8 242 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 FAM157CP0CG43 387 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 MEF2BQ02080 365 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-202ENST00000345356 AESQ08117 197 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 PSG5Q15238 335 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 C19orf48Q6RUI8 117 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 SSX8Q7RTT4 187 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 TMEM252Q8N6L7 170 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 UTP23Q9BRU9 249 aaKnown RBP10.66□□□□□ -0.7
COL12A1-202ENST00000345356 HES4Q9HCC6 221 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 MBD1Q9UIS9 605 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-202ENST00000345356 UBE2CO00762 179 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 FAM157BP0CG42 384 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 MYOGP15173 224 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 G6PCP35575 357 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 OR4P4Q8NGL7 312 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 OR1K1Q8NGR3 316 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 OR2D2Q9H210 308 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 TTC3P53804 2025 aa10.66□□□□□ -0.7
COL12A1-202ENST00000345356 C5orf52A6NGY3 159 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 CRYM-AS1A6NIL9 109 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 F2RP25116 425 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 MRPS21P82921 87 aaKnown RBP10.65□□□□□ -0.7
COL12A1-202ENST00000345356 CEACAM16Q2WEN9 425 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 RPS19BP1Q86WX3 136 aaKnown RBP10.65□□□□□ -0.7
COL12A1-202ENST00000345356 RNF2Q99496 336 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 FABP2P12104 132 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 PRSS12P56730 875 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 UBE2L3P68036 154 aaKnown RBP10.65□□□□□ -0.7
COL12A1-202ENST00000345356 SLC35B1P78383 322 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 C8orf44Q96CB5 159 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-202ENST00000345356 WFDC6Q9BQY6 131 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 HDHD3Q9BSH5 251 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-202ENST00000345356 TUBD1Q9UJT1 453 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 HS3ST3A1Q9Y663 406 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 PIN1P1O15428 100 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 HIST1H1BP16401 226 aaKnown RBP10.65□□□□□ -0.7
COL12A1-202ENST00000345356 ZIC1Q15915 447 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 C2orf68Q2NKX9 166 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 C1QL3Q5VWW1 255 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 NRTNQ99748 197 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 TMEM204Q9BSN7 226 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 TAAR3PQ9P1P4 343 aa10.65□□□□□ -0.7
COL12A1-202ENST00000345356 NGFP01138 241 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 TCTAP57738 103 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 SERF2P84101 59 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF260Q3ZCT1 412 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 Q5PR19 223 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 SLC36A1Q7Z2H8 476 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 TBX21Q9UL17 535 aa10.65□□□□□ -0.71
COL12A1-202ENST00000345356 TRBV5-5A0A0J9YX44 114 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 CORTO00230 105 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 MPLP40238 635 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 ATG4DQ86TL0 474 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-202ENST00000345356 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 ALG14Q96F25 216 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 FOXB1Q99853 325 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 FOXQ1Q9C009 403 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 DEFB108AA8MXU0 73 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 MRGPRFQ96AM1 343 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 MRPL18Q9H0U6 180 aaKnown RBP10.64□□□□□ -0.71
COL12A1-202ENST00000345356 DOCK2Q92608 1830 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 TUBGCP6Q96RT7 1819 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 A0A1B0GU03 582 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 CD46P15529 392 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 FZD5Q13467 585 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF774Q6NX45 483 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 LURAP1LQ8IV03 231 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 OR10X1Q8NGY0 326 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 DUSP23Q9BVJ7 150 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 PSG11Q9UQ72 335 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 MRPS2Q9Y399 296 aaKnown RBP10.64□□□□□ -0.71
COL12A1-202ENST00000345356 NDUFB4O95168 129 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 EXT1Q16394 746 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 ZAR1Q86SH2 424 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-202ENST00000345356 PARLQ9H300 379 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 249 ms