RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 OR52W1Q6IF63 320 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 CBLN2Q8IUK8 224 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 GVQW1Q8N7I0 195 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 CSNK2A3Q8NEV1 391 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 FAM57AQ8TBR7 257 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 PIGCQ92535 297 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 BORCS8Q96FH0 119 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 SLC5A7Q9GZV3 580 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 LPAR5Q9H1C0 372 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 C1orf123Q9NWV4 160 aa11.02□□□□□ -0.65
CLK3-201ENST00000345005 FAM230AA0A1W2PPH8 454 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 NGFP01138 241 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 CGAP01215 116 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 GNB3P16520 340 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 MST1LQ2TV78 715 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 PLCXD3Q63HM9 321 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 CLEC18BQ6UXF7 455 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 BEND4Q6ZU67 534 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 TMEM104Q8NE00 496 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 OR5D18Q8NGL1 313 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 RXFP4Q8TDU9 374 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 BANF2Q9H503 90 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 ZNF71Q9NQZ8 489 aaPredicted RBP11.01□□□□□ -0.65
CLK3-201ENST00000345005 C14orf166Q9Y224 244 aaKnown RBP11.01□□□□□ -0.65
CLK3-201ENST00000345005 FAM215AQ9Y5M1 114 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 IGF2RP11717 2491 aa11.01□□□□□ -0.65
CLK3-201ENST00000345005 IGHV2-70P01814 119 aa11□□□□□ -0.65
CLK3-201ENST00000345005 TMEM225BP0DP42 221 aa11□□□□□ -0.65
CLK3-201ENST00000345005 SPP1P10451 314 aa11□□□□□ -0.65
CLK3-201ENST00000345005 CBR1P16152 277 aa11□□□□□ -0.65
CLK3-201ENST00000345005 WNT5AP41221 380 aa11□□□□□ -0.65
CLK3-201ENST00000345005 NPBWR1P48145 328 aa11□□□□□ -0.65
CLK3-201ENST00000345005 PRSS12P56730 875 aa11□□□□□ -0.65
CLK3-201ENST00000345005 BTNL8Q6UX41 500 aa11□□□□□ -0.65
CLK3-201ENST00000345005 LHFPL1Q86WI0 220 aa11□□□□□ -0.65
CLK3-201ENST00000345005 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
CLK3-201ENST00000345005 FAM89BQ8N5H3 189 aa11□□□□□ -0.65
CLK3-201ENST00000345005 BOLLQ8N9W6 283 aaKnown RBP11□□□□□ -0.65
CLK3-201ENST00000345005 ZNF610Q8N9Z0 462 aa11□□□□□ -0.65
CLK3-201ENST00000345005 POC1AQ8NBT0 407 aa11□□□□□ -0.65
CLK3-201ENST00000345005 OR56B2PQ8NGI1 322 aa11□□□□□ -0.65
CLK3-201ENST00000345005 METTL9Q9H1A3 318 aa11□□□□□ -0.65
CLK3-201ENST00000345005 HEATR1Q9H583 2144 aaKnown RBP11□□□□□ -0.65
CLK3-201ENST00000345005 C5orf66Q9H5L9 145 aa11□□□□□ -0.65
CLK3-201ENST00000345005 PLEKHA2Q9HB19 425 aa11□□□□□ -0.65
CLK3-201ENST00000345005 OBP2BQ9NPH6 170 aa11□□□□□ -0.65
CLK3-201ENST00000345005 METTL1Q9UBP6 276 aaKnown RBP11□□□□□ -0.65
CLK3-201ENST00000345005 MEX3AA1L020 520 aaKnown RBP11□□□□□ -0.65
CLK3-201ENST00000345005 WIPF3A6NGB9 483 aa11□□□□□ -0.65
CLK3-201ENST00000345005 C5orf52A6NGY3 159 aa11□□□□□ -0.65
CLK3-201ENST00000345005 COLCA2A8K830 154 aa11□□□□□ -0.65
CLK3-201ENST00000345005 ZNF850A8MQ14 1090 aa11□□□□□ -0.65
CLK3-201ENST00000345005 C1QTNF9BB2RNN3 333 aa11□□□□□ -0.65
CLK3-201ENST00000345005 H0YIZ8 118 aa11□□□□□ -0.65
CLK3-201ENST00000345005 IFNA21P01568 189 aa11□□□□□ -0.65
CLK3-201ENST00000345005 FCGR3AP08637 254 aa11□□□□□ -0.65
CLK3-201ENST00000345005 SFTA3P0C7M3 94 aa11□□□□□ -0.65
CLK3-201ENST00000345005 C1QTNF9P0C862 333 aa11□□□□□ -0.65
CLK3-201ENST00000345005 AMY2BP19961 511 aa11□□□□□ -0.65
CLK3-201ENST00000345005 RAB5CP51148 216 aa11□□□□□ -0.65
CLK3-201ENST00000345005 AKR1C2P52895 323 aa11□□□□□ -0.65
CLK3-201ENST00000345005 AKR1C1Q04828 323 aa11□□□□□ -0.65
CLK3-201ENST00000345005 IL15RAQ13261 267 aa11□□□□□ -0.65
CLK3-201ENST00000345005 DNLZQ5SXM8 178 aa11□□□□□ -0.65
CLK3-201ENST00000345005 ASCL4Q6XD76 172 aa11□□□□□ -0.65
CLK3-201ENST00000345005 CISD2Q8N5K1 135 aaKnown RBP11□□□□□ -0.65
CLK3-201ENST00000345005 Q8NA96 180 aa11□□□□□ -0.65
CLK3-201ENST00000345005 OR51T1Q8NGJ9 327 aa11□□□□□ -0.65
CLK3-201ENST00000345005 LYPD6BQ8NI32 183 aa11□□□□□ -0.65
CLK3-201ENST00000345005 NANPQ8TBE9 248 aa11□□□□□ -0.65
CLK3-201ENST00000345005 RRNAD1Q96FB5 475 aaKnown RBP11□□□□□ -0.65
CLK3-201ENST00000345005 SULT4A1Q9BR01 284 aa11□□□□□ -0.65
CLK3-201ENST00000345005 HRH4Q9H3N8 390 aa11□□□□□ -0.65
CLK3-201ENST00000345005 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
CLK3-201ENST00000345005 ELL3Q9HB65 397 aaPredicted RBP11□□□□□ -0.65
CLK3-201ENST00000345005 CDH20Q9HBT6 801 aa11□□□□□ -0.65
CLK3-201ENST00000345005 FAM212BQ9NTI7 297 aaPredicted RBP11□□□□□ -0.65
CLK3-201ENST00000345005 RAXQ9Y2V3 346 aa11□□□□□ -0.65
CLK3-201ENST00000345005 DMRT1Q9Y5R6 373 aa11□□□□□ -0.65
CLK3-201ENST00000345005 A0A0A6YYD4 124 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 SERPINE3A8MV23 424 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 SIGLEC5O15389 551 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 MED6O75586 246 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 MUC1P15941 1255 aaPredicted RBP10.99□□□□□ -0.65
CLK3-201ENST00000345005 SERPINA2P20848 420 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 IDH3GP51553 393 aaPredicted RBP10.99□□□□□ -0.65
CLK3-201ENST00000345005 TDGF1P3P51864 188 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 RSU1Q15404 277 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 CXorf67Q86X51 503 aaPredicted RBP10.99□□□□□ -0.65
CLK3-201ENST00000345005 WDR31Q8NA23 367 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 CMBLQ96DG6 245 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 NICN1Q9BSH3 213 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 PAPOLGQ9BWT3 736 aaKnown RBP10.99□□□□□ -0.65
CLK3-201ENST00000345005 TM2D1Q9BX74 207 aa10.99□□□□□ -0.65
CLK3-201ENST00000345005 OPN3Q9H1Y3 402 aaPredicted RBP10.99□□□□□ -0.65
CLK3-201ENST00000345005 FN3KRPQ9HA64 309 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms