RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 BARX1Q9HBU1 254 aaPredicted RBP12.1□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 HLA-DQA1P01909 254 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 GCH1P30793 250 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 INSM2Q96T92 566 aaPredicted RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 RNF208Q9H0X6 261 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 PVRP15151 417 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 KLHDC9Q8NEP7 349 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 NDFIP1Q9BT67 221 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 AURKAIP1Q9NWT8 199 aaPredicted RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 B3GAT1Q9P2W7 334 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 ADH4P08319 380 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 P2RY2P41231 377 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 FUT7Q11130 342 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 A6NJY4 79 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 RABIFP47224 123 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 ZNF117Q03924 483 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 SPSB2Q99619 263 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 SH2D1BO14796 132 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 ACTL6AO96019 429 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 CD74P04233 296 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 KIAA0040Q15053 153 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 C1QL4Q86Z23 238 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 MS4A4AQ96JQ5 239 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 KLK13Q9UKR3 277 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 MRPL18Q9H0U6 180 aaKnown RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 VAMP5O95183 116 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 NKX2-6A6NCS4 301 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 OR6X1Q8NH79 312 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
TRIO-202ENST00000344204 CLDN23Q96B33 292 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 CHST5Q9GZS9 411 aa12.09□□□□□ -0.47
TRIO-202ENST00000344204 DERL1Q9BUN8 251 aa12.08□□□□□ -0.47
TRIO-202ENST00000344204 CDC42EP3Q9UKI2 254 aa12.08□□□□□ -0.47
TRIO-202ENST00000344204 MCTS1Q9ULC4 181 aaKnown RBP12.08□□□□□ -0.47
TRIO-202ENST00000344204 CYC1P08574 325 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 FMODQ06828 376 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 P2RX4Q99571 388 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 SLC45A1Q9Y2W3 748 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 CD226Q15762 336 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 PRSS38A1L453 326 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 CSN3P07498 182 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 HNRNPA1L2Q32P51 320 aaKnown RBP12.08□□□□□ -0.48
TRIO-202ENST00000344204 TMEM136Q6ZRR5 245 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 CXorf1O96002 111 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 SERF2P84101 59 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 TSEN54Q7Z6J9 526 aaKnown RBP12.08□□□□□ -0.48
TRIO-202ENST00000344204 EOGTQ5NDL2 527 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 D2HGDHQ8N465 521 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 SIGMAR1Q99720 223 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 NPIPB8E9PQR5 432 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 NPIPB7O75200 414 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 ELNP15502 786 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 ZBTB25P24278 435 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 KISS1Q15726 138 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 PTX4Q96A99 478 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 MBNL1Q9NR56 388 aaKnown RBP12.08□□□□□ -0.48
TRIO-202ENST00000344204 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 CHST1O43916 411 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 KIRREL2Q6UWL6 708 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 PLXDC1Q8IUK5 500 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 OR6C1Q96RD1 312 aa12.08□□□□□ -0.48
TRIO-202ENST00000344204 A0A087WUJ7 227 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 C4orf47A7E2U8 309 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 RNF133Q8WVZ7 376 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 RAB37Q96AX2 223 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 ALOX12BO75342 701 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 KCNE3Q9Y6H6 103 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 OR4C46A6NHA9 309 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 EFSO43281 561 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 METRNLQ641Q3 311 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
TRIO-202ENST00000344204 DNPH1O43598 174 aa12.07□□□□□ -0.48
TRIO-202ENST00000344204 CLDN15P56746 228 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms