RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 HLA-BQ31612 363 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 AARDQ4LEZ3 155 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 WIPI1Q5MNZ9 446 aaPredicted RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 CLEC18CQ8NCF0 446 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 OR10P1Q8NGE3 313 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 DPF1Q92782 380 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 CHST5Q9GZS9 411 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 MTCH1Q9NZJ7 389 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 METTL1Q9UBP6 276 aaKnown RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 J3QRE1 110 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 DTYMKP23919 212 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 EPHA8P29322 1005 aaPredicted RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 HNRNPA3P51991 378 aaKnown RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 PPP1CBP62140 327 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 EWSR1Q01844 656 aaKnown RBP eCLIP9.55□□□□□ -0.88
RPL28-201ENST00000344063 WDR25Q64LD2 544 aaPredicted RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 ZNF519Q8TB69 540 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 SIRPB1O00241 398 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 CDX1P47902 265 aaPredicted RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 P2RY4P51582 365 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 ADAMTS17Q8TE56 1095 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 ADIPOR1Q96A54 375 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 CIB3Q96Q77 187 aaPredicted RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 KCNK17Q96T54 332 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 TREM2Q9NZC2 230 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 MTCL1Q9Y4B5 1905 aaKnown RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 P2RY1P47900 373 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 GNG3P63215 75 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 LINC00114Q6XXX2 140 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 OR2M3Q8NG83 312 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 OR13G1Q8NGZ3 307 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 PINX1Q96BK5 328 aaKnown RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 RAB40CQ96S21 281 aa9.55□□□□□ -0.88
RPL28-201ENST00000344063 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 CARHSP1Q9Y2V2 147 aaKnown RBP9.55□□□□□ -0.88
RPL28-201ENST00000344063 DOCK6Q96HP0 2047 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 NKX2-6A6NCS4 301 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 TCF21O43680 179 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 ZNF737O75373 536 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 SEC11BP0C7V7 166 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 HKR1P10072 659 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 HABP2Q14520 560 aaPredicted RBP9.54□□□□□ -0.88
RPL28-201ENST00000344063 SLC10A1Q14973 349 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 EIF4E3Q8N5X7 224 aaKnown RBP9.54□□□□□ -0.88
RPL28-201ENST00000344063 OR4C5Q8NGB2 326 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 MAFAQ8NHW3 353 aaPredicted RBP9.54□□□□□ -0.88
RPL28-201ENST00000344063 AQP3Q92482 292 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 LPAR5Q9H1C0 372 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 CD8AP01732 235 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 OPN1MWP04001 364 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 OPN1MW2P0DN77 364 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 OPN1MW3P0DN78 364 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 PRF1P14222 555 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 GPM6AP51674 278 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 EGR4Q05215 589 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 LY6G6FQ5SQ64 297 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 BTNL8Q6UX41 500 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 MUCL1Q96DR8 90 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 ADGRG7Q96K78 797 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 CBLN4Q9NTU7 201 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 CLCF1Q9UBD9 225 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 WNT16Q9UBV4 365 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 GPR132Q9UNW8 380 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 CHST1O43916 411 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 PATE4P0C8F1 98 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 MOB1BQ7L9L4 216 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 MYOZ1Q9NP98 299 aaPredicted RBP9.54□□□□□ -0.88
RPL28-201ENST00000344063 LOXL2Q9Y4K0 774 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 HEATR5BQ9P2D3 2071 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 OR8U8P0C7N1 319 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 COX5AP20674 150 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 PCP4P48539 62 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 TPPP2P59282 170 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 RBPJQ06330 500 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 PLPPR5Q32ZL2 321 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 OR11L1Q8NGX0 322 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 ZPBPQ9BS86 351 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 C5orf66Q9H5L9 145 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 SLC2A8Q9NY64 477 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 PITPNC1Q9UKF7 332 aa9.54□□□□□ -0.88
RPL28-201ENST00000344063 DPPA3Q6W0C5 159 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 GPHA2Q96T91 129 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 KRASP01116 189 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 CTSBP07858 339 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 SLC25A6P12236 298 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
RPL28-201ENST00000344063 PRAMEF5Q5TYX0 476 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 PRAMEF6Q5VXH4 476 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 ERGIC1Q969X5 290 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 CLDN23Q96B33 292 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 ZNF501Q96CX3 271 aaPredicted RBP9.53□□□□□ -0.88
RPL28-201ENST00000344063 SIRT7Q9NRC8 400 aa9.53□□□□□ -0.88
RPL28-201ENST00000344063 TMEM74BQ9NUR3 256 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms