RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CST9LP1Q5W188 147 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 SLC16A14Q7RTX9 510 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 GNPNAT1Q96EK6 184 aaPredicted RBP12.86□□□□□ -0.35
CLCN1-201ENST00000343257 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
CLCN1-201ENST00000343257 HBE1P02100 147 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 OPN1MWP04001 364 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 OPN1MW2P0DN77 364 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 OPN1MW3P0DN78 364 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 GUCA1AP43080 201 aaPredicted RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 COL13A1Q5TAT6 717 aaPredicted RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 CALHM1Q8IU99 346 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 RCC1LQ96I51 464 aaKnown RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 IGKV1-27A0A075B6S5 117 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 FGF5P12034 268 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 RND2P52198 227 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 HERPUD1Q15011 391 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 RBKSQ9H477 322 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF286AQ9HBT8 521 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 SLC7A10Q9NS82 523 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 OR7C1O76099 320 aaPredicted RBP12.85□□□□□ -0.35
CLCN1-201ENST00000343257 PPYP01298 95 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 BMP5P22003 454 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 GALR1P47211 349 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 DNLZQ5SXM8 178 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 TMEM92Q6UXU6 159 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 Q6ZPA2 131 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 CCDC71LQ8N9Z2 235 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 OR1N1Q8NGS0 311 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 TMEM208Q9BTX3 173 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 PLEK2Q9NYT0 353 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
CLCN1-201ENST00000343257 PRUNE2Q8WUY3 3088 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 BLACEA4D250 179 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 B4DEV8 164 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF732B4DXR9 585 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 IFNA5P01569 189 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 PATE4P0C8F1 98 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 TDGF1P3P51864 188 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF726P1Q15940 193 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 DECR2Q9NUI1 292 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 ALKBH4Q9NXW9 302 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 SDK2Q58EX2 2172 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 TRBV24-1A0A075B6N3 115 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 POU2F2P09086 479 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 ARL4DP49703 201 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 NUBP1P53384 320 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 TAS2R30P59541 319 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
CLCN1-201ENST00000343257 GAPTQ8N292 157 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 LRTM2Q8N967 370 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 CAPNS2Q96L46 248 aa12.84□□□□□ -0.35
CLCN1-201ENST00000343257 TCRBV21S2A2A0A5A6 115 aa12.83□□□□□ -0.35
CLCN1-201ENST00000343257 H7BYZ3 331 aa12.83□□□□□ -0.35
CLCN1-201ENST00000343257 TRAF3IP2O43734 574 aaPredicted RBP12.83□□□□□ -0.35
CLCN1-201ENST00000343257 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.35
CLCN1-201ENST00000343257 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.35
CLCN1-201ENST00000343257 SLC25A47Q6Q0C1 308 aa12.83□□□□□ -0.35
CLCN1-201ENST00000343257 MOB3AQ96BX8 217 aa12.83□□□□□ -0.35
CLCN1-201ENST00000343257 ADGRG7Q96K78 797 aa12.83□□□□□ -0.35
CLCN1-201ENST00000343257 SEMA5BQ9P283 1151 aa12.83□□□□□ -0.35
CLCN1-201ENST00000343257 ANKUB1A6NFN9 424 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 LRRC3CA6NJW4 275 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 TK1P04183 234 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 METTL15P1P0C7V9 234 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 CCL1P22362 96 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 ZNF41P51814 821 aaPredicted RBP12.83□□□□□ -0.36
CLCN1-201ENST00000343257 PHYHD1Q5SRE7 291 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 ZNF818PQ6ZRF7 136 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 GATAD1Q8WUU5 269 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 OR5B12Q96R08 314 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 ATP5SQ99766 215 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 TMEM222Q9H0R3 208 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 Q9N2K0 584 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 PRSS50Q9UI38 385 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 ZNF407Q9C0G0 2248 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 IGKV1-12A0A0C4DH73 117 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 IGKV1D-12P01611 117 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 CAPZBP47756 277 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 GRB2P62993 217 aaKnown RBP12.83□□□□□ -0.36
CLCN1-201ENST00000343257 TMEM18Q96B42 140 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 SDSLQ96GA7 329 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
CLCN1-201ENST00000343257 DOCK11Q5JSL3 2073 aa12.82□□□□□ -0.36
CLCN1-201ENST00000343257 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms