RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NEURL4Q96JN8 1562 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 NAA50Q9GZZ1 169 aaKnown RBP15.73■□□□□ 0.11
SMAD4-201ENST00000342988 NRG2O14511 850 aaPredicted RBP15.73■□□□□ 0.11
SMAD4-201ENST00000342988 SLC39A5Q6ZMH5 540 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 Q7L0L9 218 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 RGPD4Q7Z3J3 1758 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 WNT5AP41221 380 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 LRRC75BQ2VPJ9 315 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 TRAV8-7A0A075B6U6 113 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 PRNDQ9UKY0 176 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 PMELP40967 661 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 RAG2P55895 527 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 Q6ZPB1 254 aaPredicted RBP15.73■□□□□ 0.11
SMAD4-201ENST00000342988 MRGPRGQ86SM5 289 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 PIANPQ8IYJ0 282 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 KBTBD11O94819 623 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 DCTDP32321 178 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 OR5A1Q8NGJ0 315 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 RBPJLQ9UBG7 517 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 KCNAB3O43448 404 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 GALP22466 123 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 SRSF5Q13243 272 aaKnown RBP15.73■□□□□ 0.11
SMAD4-201ENST00000342988 COL9A2Q14055 689 aaPredicted RBP15.73■□□□□ 0.11
SMAD4-201ENST00000342988 SLC25A40Q8TBP6 338 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 SARGQ9BW04 601 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 CD74P04233 296 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 TNFAIP6P98066 277 aaPredicted RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 ZNF506Q5JVG8 444 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 ZNF740Q8NDX6 193 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 WNT5BQ9H1J7 359 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 DHCR7Q9UBM7 475 aaKnown RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 COL11A1P12107 1806 aaPredicted RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 CDK5R1Q15078 307 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 PEF1Q9UBV8 284 aaKnown RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 C9orf170A2RU37 121 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 SLC17A2O00624 439 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 LHX8Q68G74 356 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 SMAD6O43541 496 aaKnown RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 FGF5P12034 268 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 MC5RP33032 325 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 TCL1AP56279 114 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 SUMO2P61956 95 aaKnown RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 ATOH8Q96SQ7 321 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 NDUFS8O00217 210 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 SPATA46Q5T0L3 261 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 TMEFF1Q8IYR6 380 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 ERRFI1Q9UJM3 462 aaPredicted RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 TSC2P49815 1807 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 FAAP20Q6NZ36 180 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 TCF24Q7RTU0 167 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 TCF23Q7RTU1 214 aa15.72■□□□□ 0.11
SMAD4-201ENST00000342988 SPTAN1Q13813 2472 aaKnown RBP15.72■□□□□ 0.11
SMAD4-201ENST00000342988 C17orf51A8MQB3 221 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 RNF133Q8WVZ7 376 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 ABHD14AQ9BUJ0 271 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 TAF1P21675 1872 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 FOLR2P14207 255 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 LAMTOR1Q6IAA8 161 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 IL19Q9UHD0 177 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 C7orf72A4D263 438 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 SLCO4C1Q6ZQN7 724 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 NFAM1Q8NET5 270 aaPredicted RBP15.71■□□□□ 0.11
SMAD4-201ENST00000342988 MBNL1Q9NR56 388 aaKnown RBP15.71■□□□□ 0.11
SMAD4-201ENST00000342988 J3KRW8 73 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 EIF3IQ13347 325 aaKnown RBP15.71■□□□□ 0.11
SMAD4-201ENST00000342988 MRGPREQ86SM8 312 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 NEUROG1Q92886 237 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 VN1R1Q9GZP7 353 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 TMPRSS2O15393 492 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 FTH1P19P0C7X4 201 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 UBE2V2Q15819 145 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 LRRC75AQ8NAA5 344 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 ZNF418Q8TF45 676 aaPredicted RBP15.71■□□□□ 0.11
SMAD4-201ENST00000342988 CCL17Q92583 94 aa15.71■□□□□ 0.11
SMAD4-201ENST00000342988 INSM2Q96T92 566 aaPredicted RBP15.71■□□□□ 0.11
SMAD4-201ENST00000342988 CTSCP53634 463 aa15.71■□□□□ 0.1
SMAD4-201ENST00000342988 ABHD17CQ6PCB6 329 aa15.71■□□□□ 0.1
SMAD4-201ENST00000342988 ZNF385DQ9H6B1 395 aa15.71■□□□□ 0.1
SMAD4-201ENST00000342988 TRAV39A0A0B4J263 110 aa15.71■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM250H0YL14 139 aa15.71■□□□□ 0.1
SMAD4-201ENST00000342988 ABHD3Q8WU67 409 aa15.71■□□□□ 0.1
SMAD4-201ENST00000342988 H3BRM9 83 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 P2RY1P47900 373 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 KCNAB1Q14722 419 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 ZNF324BQ6AW86 544 aaPredicted RBP15.7■□□□□ 0.1
SMAD4-201ENST00000342988 TEPPQ6URK8 271 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 TRDCB7Z8K6 153 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 NDUFB6O95139 128 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 MEGF10Q96KG7 1140 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 AICDAQ9GZX7 198 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 SDF2Q99470 211 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 DHRS2Q13268 280 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 HIGD1AQ9Y241 93 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM189A5PLL7 270 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 C9orf172C9J069 976 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM189-UBE2V1I3L0A0 370 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 ICOSLGO75144 302 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms