RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 VAX1Q5SQQ9 334 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF343Q6P1L6 599 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 CCDC71LQ8N9Z2 235 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 OR10D4PQ8NGN7 298 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 OR2V1Q8NHB1 315 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 INTS12Q96CB8 462 aaKnown RBP10.86□□□□□ -0.67
LMX1A-202ENST00000342310 PLK3Q9H4B4 646 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 CYTL1Q9NRR1 136 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 C19orf12Q9NSK7 152 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 LOC102725191A0A1B0GVB3 256 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 E5RGE8 158 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 MELTFP08582 738 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 FUT3P21217 361 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 S100GP29377 79 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 PLA2G5P39877 138 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 PRDX4Q13162 271 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 EDDM3AQ14507 147 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 FIP1L1Q6UN15 594 aaKnown RBP10.86□□□□□ -0.67
LMX1A-202ENST00000342310 POC1AQ8NBT0 407 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 SLC30A7Q8NEW0 376 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 OR2Y1Q8NGV0 311 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 PTX4Q96A99 478 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 PHYHIPLQ96FC7 376 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 AURKAIP1Q9NWT8 199 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-202ENST00000342310 OSGIN2Q9Y236 505 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 NSG2Q9Y328 171 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 STARD10Q9Y365 291 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 IGHV1-45A0A0A0MS14 117 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 IFI6P09912 130 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 H2AFB1P0C5Y9 115 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 COX6A1P12074 109 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 CEBPDP49716 269 aaPredicted RBP10.85□□□□□ -0.67
LMX1A-202ENST00000342310 EXT1Q16394 746 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 SCGB1C1Q8TD33 95 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 OCSTAMPQ9BR26 566 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 C3orf85A0A1B0GTC6 90 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 ARGFXA6NJG6 315 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 CHST1O43916 411 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 KRASP01116 189 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 RAC3P60763 192 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
LMX1A-202ENST00000342310 TMEM164Q5U3C3 297 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 CA5BP1Q8WTZ4 195 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 DNASE2BQ8WZ79 361 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 OBP2BQ9NPH6 170 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 TMEM38BQ9NVV0 291 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 IGHV3-43A0A0B4J1X8 118 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 PINLYPA6NC86 204 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 PDCD6O75340 191 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 IGHV3-43DP0DP04 118 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 LSM6P62312 80 aaKnown RBP10.85□□□□□ -0.67
LMX1A-202ENST00000342310 PMP22Q01453 160 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 DEFA6Q01524 100 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
LMX1A-202ENST00000342310 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 DEPPQ9NTK1 212 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 ZMAT5Q9UDW3 170 aaKnown RBP10.85□□□□□ -0.67
LMX1A-202ENST00000342310 TCFL5Q9UL49 500 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 LAMA5O15230 3695 aa10.85□□□□□ -0.67
LMX1A-202ENST00000342310 ANKRD30BLA7E2S9 258 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 ARL6IP1Q15041 203 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 RAB35Q15286 201 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 MPV17LQ2QL34 196 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 FAHD2BQ6P2I3 314 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 FAHD2AQ96GK7 314 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 Q96M66 194 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 UNKLQ9H9P5 680 aaKnown RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF816-ZNF321PA0A0X1KG74 233 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 A0A1W2PNV4 684 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 CYB5BO43169 146 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 LYZL6O75951 148 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 SCAF4O95104 1147 aaKnown RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 IFNA5P01569 189 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 APLNRP35414 380 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 FABP6P51161 128 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 OR2C3Q8N628 320 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 ZIC4Q8N9L1 334 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 CPEB3Q8NE35 698 aaKnown RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 PBDC1Q9BVG4 233 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 RCC2Q9P258 522 aaKnown RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 TLN1Q9Y490 2541 aaKnown RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 DMXL2Q8TDJ6 3036 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 CD300LBA8K4G0 201 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 H0YL77 283 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 KLF7O75840 302 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 NXPH2O95156 264 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 CLDN1O95832 211 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 DYNLT3P51808 116 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 CCL20P78556 96 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF816Q0VGE8 651 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 APH1AQ96BI3 265 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 RSG1Q9BU20 258 aa10.84□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF552Q9H707 407 aaPredicted RBP10.84□□□□□ -0.67
LMX1A-202ENST00000342310 FAM3AP98173 230 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 DNM1P46Q6ZS02 220 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 WFDC1Q9HC57 220 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms