RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 OR51B6Q9H340 312 aa17.23■□□□□ 0.35
SPG7-202ENST00000341316 CD46P15529 392 aa17.23■□□□□ 0.35
SPG7-202ENST00000341316 OR5L1Q8NGL2 311 aa17.23■□□□□ 0.35
SPG7-202ENST00000341316 ERGIC1Q969X5 290 aa17.23■□□□□ 0.35
SPG7-202ENST00000341316 GALNT14Q96FL9 552 aa17.23■□□□□ 0.35
SPG7-202ENST00000341316 SYNGR1O43759 233 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 TRIP6Q15654 476 aaKnown RBP17.22■□□□□ 0.35
SPG7-202ENST00000341316 SWI5Q1ZZU3 235 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 LYZL2Q7Z4W2 148 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 CD300LBA8K4G0 201 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 DUSP1P28562 367 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 PMELP40967 661 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 AKR1C3P42330 323 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 FGF12P61328 243 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 IGFBP7Q16270 282 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 ZNF766Q5HY98 468 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 VASH2Q86V25 355 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 SECTM1Q8WVN6 248 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 BSCL2Q96G97 398 aaPredicted RBP17.22■□□□□ 0.35
SPG7-202ENST00000341316 CACFD1Q9UGQ2 172 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 KCNIP3Q9Y2W7 256 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 POMT1Q9Y6A1 747 aa17.22■□□□□ 0.35
SPG7-202ENST00000341316 OTOGLQ3ZCN5 2332 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 NOVA1P51513 510 aaKnown RBP17.21■□□□□ 0.35
SPG7-202ENST00000341316 PMP22Q01453 160 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 PLP2Q04941 152 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 OR1K1Q8NGR3 316 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 SFT2D1Q8WV19 159 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 SMCO4Q9NRQ5 59 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 LAMA5O15230 3695 aa17.21■□□□□ 0.35
SPG7-202ENST00000341316 TRGV5A0A0B4J1U4 118 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 HSPB6O14558 160 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 MEOX2P50222 304 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 PPT1P50897 306 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 ARG2P78540 354 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 SRSF6Q13247 344 aaKnown RBP17.21■□□□□ 0.34
SPG7-202ENST00000341316 SAXO1Q8IYX7 474 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 LYPD6BQ8NI32 183 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 MSI2Q96DH6 328 aaKnown RBP17.21■□□□□ 0.34
SPG7-202ENST00000341316 C14orf79Q96F83 325 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 ZNF488Q96MN9 340 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 SHANK1Q9Y566 2161 aa17.21■□□□□ 0.34
SPG7-202ENST00000341316 MBPP02686 304 aaPredicted RBP17.2■□□□□ 0.34
SPG7-202ENST00000341316 UCP3P55916 312 aa17.2■□□□□ 0.34
SPG7-202ENST00000341316 HABP2Q14520 560 aaPredicted RBP17.2■□□□□ 0.34
SPG7-202ENST00000341316 BCL2L2Q92843 193 aaPredicted RBP17.2■□□□□ 0.34
SPG7-202ENST00000341316 C18orf12Q96KH6 178 aa17.2■□□□□ 0.34
SPG7-202ENST00000341316 CLCC1Q96S66 551 aa17.2■□□□□ 0.34
SPG7-202ENST00000341316 USB1Q9BQ65 265 aaKnown RBP17.2■□□□□ 0.34
SPG7-202ENST00000341316 RSRP1Q9BUV0 290 aa17.2■□□□□ 0.34
SPG7-202ENST00000341316 FBXO9Q9UK97 447 aaPredicted RBP17.2■□□□□ 0.34
SPG7-202ENST00000341316 ARHGAP21Q5T5U3 1957 aa17.2■□□□□ 0.34
SPG7-202ENST00000341316 TNRC6AQ8NDV7 1962 aaKnown RBP17.2■□□□□ 0.34
SPG7-202ENST00000341316 CNOT1A5YKK6 2376 aaKnown RBP17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A10PA6NDY2 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A18PA6NE21 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A16PA6NEW6 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A20PA6NIJ5 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A8PA6NJQ4 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A7PA6NKC0 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A22PA8MWA6 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A12PA8MX19 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A5PA8MXJ8 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A23PA8MXZ1 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 PPYP01298 95 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A15PP0C7V4 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A13PP0C7W8 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A14PP0C7W9 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FAM90A24PP0C7X0 464 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 TSC22D1Q15714 1073 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 MDP1Q86V88 176 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 UBAC2Q8NBM4 344 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 OR5A2Q8NGI9 324 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 OR5P3Q8WZ94 311 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 SLC22A20A6NK97 555 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 NAPSAO96009 420 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 GLP1RP43220 463 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 CLN3Q13286 438 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 MIDNQ504T8 468 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 FBXW9Q5XUX1 488 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 LIAT1Q6ZQX7 453 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 LRTM2Q8N967 370 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 POM121Q96HA1 1249 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 PLEKHA2Q9HB19 425 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 Q9N2K0 584 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 KPTNQ9Y664 436 aa17.19■□□□□ 0.34
SPG7-202ENST00000341316 TSPAN15O95858 294 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 IFNA4P05014 189 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 SCTP09683 121 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 FOLR2P14207 255 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 APLNRP35414 380 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 HERV-K104P61576 105 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 SPATA46Q5T0L3 261 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 MYPOPQ86VE0 399 aaPredicted RBP17.18■□□□□ 0.34
SPG7-202ENST00000341316 TP53RKQ96S44 253 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 SUCNR1Q9BXA5 334 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 IFT22Q9H7X7 185 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 ZDHHC11Q9H8X9 412 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 WFDC1Q9HC57 220 aa17.18■□□□□ 0.34
SPG7-202ENST00000341316 TRAPPC2LH3BP13 241 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms