RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NKD1Q969G9 470 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 ZNF845Q96IR2 970 aaPredicted RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 CMKLR1Q99788 373 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 CKLFQ9UBR5 152 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 TUBD1Q9UJT1 453 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 A0A1B0GWA3 101 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 PLXDC1Q8IUK5 500 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 PRR22Q8IZ63 422 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 D2HGDHQ8N465 521 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 ZFP62Q8NB50 900 aaPredicted RBP10.31□□□□□ -0.76
RTN3-203ENST00000341307 LOXL4Q96JB6 756 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 VAMP8Q9BV40 100 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 SDF2L1Q9HCN8 221 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 SLC2A9Q9NRM0 540 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 TMEM106BQ9NUM4 274 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 ZNF701Q9NV72 531 aaPredicted RBP10.31□□□□□ -0.76
RTN3-203ENST00000341307 OR6C3Q9NZP0 311 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 CLEC18AA5D8T8 446 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 TMEM212A6NML5 194 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 C4orf47A7E2U8 309 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 TUBG1P23258 451 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 Q6ZWC4 215 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 IL22RA1Q8N6P7 574 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 CLEC18CQ8NCF0 446 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 OR4D5Q8NGN0 318 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 ABHD3Q8WU67 409 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 RASL10BQ96S79 203 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 LPAR4Q99677 370 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 CTDSP1Q9GZU7 261 aa10.31□□□□□ -0.76
RTN3-203ENST00000341307 MRPS28Q9Y2Q9 187 aaKnown RBP10.31□□□□□ -0.76
RTN3-203ENST00000341307 LOC102724200A0A096LPH7 203 aaPredicted RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 A0A0B4J2E0 115 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 A0A1B0GX12 115 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 C17orf51A8MQB3 221 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 CDKN1AP38936 164 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 FREM2Q5SZK8 3169 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 LYSMD4Q5XG99 296 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 MEX3BQ6ZN04 569 aaKnown RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 DPY19L2P2Q6ZN68 376 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 NECAP1Q8NC96 275 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 GPR146Q96CH1 333 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 ADOQ96SZ5 270 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 LAMTOR2Q9Y2Q5 125 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 SEC16AO15027 2179 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 TRAV30A0A087WSZ9 112 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 OR6A2O95222 327 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 SCGB1D2O95969 90 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 CNN1P51911 297 aaKnown RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 RPL23AP62750 156 aaKnown RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 PRAMEF20Q5VT98 475 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 GUSBP11Q6P575 273 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 CATSPERDQ86XM0 798 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 OR51G1Q8NGK1 321 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 OR10G4Q8NGN3 311 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 SGCZQ96LD1 299 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 KLHDC3Q9BQ90 382 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 ALG12Q9BV10 488 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 ZNF700Q9H0M5 742 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 NXF5Q9H1B4 397 aaKnown RBP10.3□□□□□ -0.76
RTN3-203ENST00000341307 FGF21Q9NSA1 209 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 AK3Q9UIJ7 227 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 SLC45A2Q9UMX9 530 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 PIEZO1Q92508 2521 aa10.3□□□□□ -0.76
RTN3-203ENST00000341307 PI4KAP42356 2102 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 GDF9O60383 454 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 GPR137BO60478 399 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 CSTAP01040 98 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 IFI6P09912 130 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 GLRA1P23415 457 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 HSD11B1P28845 292 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 NBL1P41271 181 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 COMPP49747 757 aaPredicted RBP10.29□□□□□ -0.76
RTN3-203ENST00000341307 RIPPLY3P57055 190 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 RAB11AP62491 216 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
RTN3-203ENST00000341307 WDR38Q5JTN6 314 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 TMEM225Q6GV28 225 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 C16orf82Q7Z2V1 217 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 OR5D18Q8NGL1 313 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 C4orf45Q96LM5 186 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 C22orf46C9J442 243 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 LILRA1O75019 489 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 GNB3P16520 340 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 ZNF43P17038 809 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 BIDP55957 195 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 ZNF92Q03936 586 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 CD226Q15762 336 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 ZNF141Q15928 474 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 CBLN3Q6UW01 205 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 SLC16A9Q7RTY1 509 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 CHST4Q8NCG5 386 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 OR2G3Q8NGZ4 309 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 THRSPQ92748 146 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 ZNF524Q96C55 264 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 RASD2Q96D21 266 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 IMMP2LQ96T52 175 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms