RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 A0A1W2PR80 420 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 ETV2O00321 342 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-201ENST00000340437 CTSSP25774 331 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 ALDH3B1P43353 468 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 FGF8P55075 233 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-201ENST00000340437 RAC1P63000 192 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 CTAG1AP78358 180 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 LCN15Q6UWW0 184 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 GNG13Q9P2W3 67 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 ARHGAP21Q5T5U3 1957 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 H3BQ15 152 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 RRP8O43159 456 aaKnown RBP12.42□□□□□ -0.42
CPSF7-201ENST00000340437 HSPA12AO43301 675 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 UMODP07911 640 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 IAPPP10997 89 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-201ENST00000340437 CLEC12BQ2HXU8 276 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 GPR157Q5UAW9 335 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 CYB561D1Q8N8Q1 229 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 C18orf12Q96KH6 178 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 GINS3Q9BRX5 216 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 IGLV3-32A0A0A0MS00 114 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 IFNA17P01571 189 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 PLA2G5P39877 138 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 RND3P61587 244 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 RPS16P62249 146 aaKnown RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 Q6ZPA2 131 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 TMEM171Q8WVE6 324 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 SGCZQ96LD1 299 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 PROK2Q9HC23 129 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 FAM86C1Q9NVL1 165 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 CRIM1Q9NZV1 1036 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF318Q5VUA4 2279 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 COL6A6A6NMZ7 2263 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 IGHV1-45A0A0A0MS14 117 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 IGKV1D-13A0A0B4J2D9 117 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 CBR3O75828 277 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 IGKV1-13P0DP09 117 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 FUT6P51993 359 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 IL13RA2Q14627 380 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF385CQ66K41 422 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 LINC00696Q6ZRV3 163 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 TMEM252Q8N6L7 170 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 BOD1Q96IK1 185 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 WNT5BQ9H1J7 359 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 SEMA5BQ9P283 1151 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 POMT1Q9Y6A1 747 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 OR8U8P0C7N1 319 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 DTYMKP23919 212 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 CLDN15P56746 228 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 RBM11P57052 281 aaKnown RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 MOB3AQ96BX8 217 aa12.41□□□□□ -0.42
CPSF7-201ENST00000340437 FOXD3Q9UJU5 478 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-201ENST00000340437 LY86O95711 162 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 IGLV3-1P01715 115 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-201ENST00000340437 RAB11AP62491 216 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 CMTM1Q8IZ96 169 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 GLRX2Q9NS18 164 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 TMED3Q9Y3Q3 217 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 AP4M1O00189 453 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 CYB5BO43169 146 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 CRYGSP22914 178 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 OTX1P32242 354 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-201ENST00000340437 MRPL14Q6P1L8 145 aaKnown RBP12.4□□□□□ -0.42
CPSF7-201ENST00000340437 GALNT14Q96FL9 552 aa12.4□□□□□ -0.42
CPSF7-201ENST00000340437 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
CPSF7-201ENST00000340437 LAMTOR5O43504 91 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 S100A8P05109 93 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 COX6A1P12074 109 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 DLK1P80370 383 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 ZNF266Q14584 549 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 MPV17LQ2QL34 196 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 SPATA46Q5T0L3 261 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 SPEM1Q8N4L4 309 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.43
CPSF7-201ENST00000340437 DNASE2BQ8WZ79 361 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 ZNF251Q9BRH9 671 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 ANGPTL4Q9BY76 406 aa12.4□□□□□ -0.43
CPSF7-201ENST00000340437 TGIF2-C20orf24A0A0A6YYL0 155 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 ZNF816-ZNF321PA0A0X1KG74 233 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 ZNF732B4DXR9 585 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 TRDCB7Z8K6 153 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 RAC3P60763 192 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 SPINK14Q6IE38 97 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 MRPL21Q7Z2W9 205 aaKnown RBP12.39□□□□□ -0.43
CPSF7-201ENST00000340437 IL22RA1Q8N6P7 574 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 DUSP23Q9BVJ7 150 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 PROB1E7EW31 1015 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 AGAP20933 346 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms