RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 TMED6Q8WW62 240 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 RTL8AQ9BWD3 113 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 POLDIP2Q9Y2S7 368 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 BDP1A6H8Y1 2624 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ARGFXA6NJG6 315 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 H0Y980 276 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SMPD2O60906 423 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ATG12O94817 140 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CAV2P51636 162 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TMEM33P57088 247 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ZNF146Q15072 292 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 Q6P435 159 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 BTNL8Q6UX41 500 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 LYZL2Q7Z4W2 148 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FAM169BQ8N8A8 192 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SUMF2Q8NBJ7 301 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 OR5D13Q8NGL4 314 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 MICU1Q9BPX6 476 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SEC11CQ9BY50 192 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HIPK2Q9H2X6 1198 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 OBP2BQ9NPH6 170 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FBXL17Q9UF56 701 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PCNX2A6NKB5 2137 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CACNA1GO43497 2377 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SLC34A2O95436 690 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CCNOP22674 350 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HLA-DRB3P79483 266 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HIKESHIQ53FT3 197 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 C9orf135Q5VTT2 229 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 RPL7L1Q6DKI1 246 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FAM214BQ7L5A3 538 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 C17orf78Q8N4C9 275 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SPERTQ8NA61 448 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 OR5T2Q8NGG2 359 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TP53RKQ96S44 253 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 GPR179Q6PRD1 2367 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SHANK1Q9Y566 2161 aa9.14□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TRAV24A0A0B4J272 114 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 KCNAB3O43448 404 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SYNGR1O43759 233 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 IGKV3-15P01624 115 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CCL2P13500 99 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 LMO1P25800 156 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FXYD4P59646 89 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ZNF169Q14929 603 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 MSMO1Q15800 293 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 NMSQ5H8A3 153 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 H1FOOQ8IZA3 346 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SVBPQ8N300 66 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 LILRB1Q8NHL6 650 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 WNT2BQ93097 391 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 AKR1E2Q96JD6 320 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TOLLIPQ9H0E2 274 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 DEFB127Q9H1M4 99 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HES4Q9HCC6 221 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ASF1BQ9NVP2 202 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TRAV17A0A0B4J275 112 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 IGKV1-6A0A0C4DH72 117 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ABCD4O14678 606 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PHF1O43189 567 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SPP1P10451 314 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CBR1P16152 277 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 VDAC1P21796 283 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 F2RL1P55085 397 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ZNF324BQ6AW86 544 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 OR2A2Q6IF42 318 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HAGHLQ6PII5 290 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 BRICD5Q6PL45 260 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SLC35G3Q8N808 338 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SNIP1Q8TAD8 396 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 MBNL3Q9NUK0 354 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 WIPI2Q9Y4P8 454 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ZNF407Q9C0G0 2248 aa9.13□□□□□ -0.95
TRAF3IP2-201ENST00000340026 BORCS7-ASMTA0A0B4J1R7 106 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FAM221AA4D161 298 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CD5P06127 495 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FTH1P19P0C7X4 201 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PGA5P0DJD9 388 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PRKACAP17612 351 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 IGHV1-2P23083 117 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PAX5Q02548 391 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 C3AR1Q16581 482 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PHLDA2Q53GA4 152 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CMTM1Q8IZ96 169 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SELENOHQ8IZQ5 122 aaKnown RBP9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HS3ST6Q96QI5 342 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 NRIP2Q9BQI9 281 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 TLNRD1Q9H1K6 362 aa9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 SEBOXQ9HB31 216 aaPredicted RBP9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FAM212BQ9NTI7 297 aaPredicted RBP9.12□□□□□ -0.95
TRAF3IP2-201ENST00000340026 DLL3Q9NYJ7 618 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms