RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PCNX1Q96RV3 2341 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ALG1L2C9J202 215 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 M0R143 59 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 CRISP2P16562 243 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ORM2P19652 201 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 BMI1P35226 326 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 DRD3P35462 400 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ZFP36L2P47974 494 aaKnown RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 FUT6P51993 359 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 H2BFSP57053 126 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 C3AR1Q16581 482 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PRSS53Q2L4Q9 553 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 TMEM240Q5SV17 173 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 DHRS11Q6UWP2 260 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 TBC1D26Q86UD7 250 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 GAPTQ8N292 157 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 SPACA9Q96E40 222 aaPredicted RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 PLA2G2FQ9BZM2 168 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 TMED3Q9Y3Q3 217 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 RGPD3A6NKT7 1758 aaPredicted RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 RGPD4Q7Z3J3 1758 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 SPTY2D1-AS1A0A0U1RR47 76 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 A0A1W2PPC4 97 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 SHISA3A0PJX4 238 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PMS2P1A4D2B8 440 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PAGE4O60829 102 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 FBP1P09467 338 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 CTGFP29279 349 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 FAM3BP58499 235 aaPredicted RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 TAS2R45P59539 299 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 IZUMO4Q1ZYL8 232 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 TPRX1Q8N7U7 411 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ZNF784Q8NCA9 323 aaPredicted RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 OR2Z1Q8NG97 314 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 NTNG2Q96CW9 530 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 CXorf65A6NEN9 183 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 FIGNL2A6NMB9 653 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 FAM157AC9JC47 383 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PLRG1O43660 514 aaKnown RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 DHRS3O75911 302 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 GABRG2P18507 467 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 FZD2Q14332 565 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 HIST3H3Q16695 136 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 CD300LDQ6UXZ3 194 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 OR1L3Q8NH93 324 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 MRGPRFQ96AM1 343 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 MS4A3Q96HJ5 214 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 CDCA3Q99618 268 aaPredicted RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 SMOC1Q9H4F8 434 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PRSS50Q9UI38 385 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ANXA10Q9UJ72 324 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 J3KRW8 73 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 LYZL6O75951 148 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 OTX1P32242 354 aaPredicted RBP7.67□□□□□ -1.18
RTN3-202ENST00000339997 SLC25A1P53007 311 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PNLIPRP3Q17RR3 467 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ATRAIDQ6UW56 229 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 OR2M3Q8NG83 312 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 OR4A4PQ8NGN8 299 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 TMEM230Q96A57 120 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 PIK3IP1Q96FE7 263 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 ZNF488Q96MN9 340 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 KCNK7Q9Y2U2 307 aa7.67□□□□□ -1.18
RTN3-202ENST00000339997 IGHV3-21A0A0B4J1V1 117 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 H0YL77 283 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 OGG1O15527 345 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 GOSR1O95249 250 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 RECKO95980 971 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 ZNF137PP52743 207 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 GNB2P62879 340 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 OR10AD1Q8NGE0 317 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 NRIP2Q9BQI9 281 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 TDRD6O60522 2096 aaKnown RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 PI4KAP42356 2102 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 IGKV3-7A0A075B6H7 116 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 NKX6-3A6NJ46 265 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 RBP4P02753 201 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 ATP6V0CP27449 155 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 IER3P46695 156 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 ERHP84090 104 aaKnown RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 LHX8Q68G74 356 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 RGS7BPQ6MZT1 257 aaPredicted RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 LDLRAD3Q86YD5 345 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 SLC26A10Q8NG04 563 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 RSG1Q9BU20 258 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 FKBP11Q9NYL4 201 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 NEU3Q9UQ49 428 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 MCM3APO60318 1980 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 C7orf66A4D0T2 115 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 PLPP3O14495 311 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 SELEP16581 610 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 CD40P25942 277 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 CCKARP32238 428 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 OPRK1P41145 380 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 CNN1P51911 297 aaKnown RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 ZNF385CQ66K41 422 aaPredicted RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 FA2HQ7L5A8 372 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 NUFIP2Q7Z417 695 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms