RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZNF92Q03936 586 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 ZP4Q12836 540 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 COL19A1Q14993 1142 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 SSX2Q16385 188 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF468Q5VIY5 522 aaPredicted RBP12.27□□□□□ -0.45
PCDH8-201ENST00000338862 CST9LP1Q5W188 147 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 LFNGQ8NES3 379 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 OR56B2PQ8NGI1 322 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 OR1F12Q8NHA8 337 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 Q8WTZ3 238 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 MRPL13Q9BYD1 178 aaKnown RBP12.27□□□□□ -0.45
PCDH8-201ENST00000338862 OCIAD1Q9NX40 245 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 FREM1Q5H8C1 2179 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 A0A087X0M5 115 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 A0A1B0GX30 115 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 RPS19BP1Q86WX3 136 aaKnown RBP12.27□□□□□ -0.45
PCDH8-201ENST00000338862 DTX1Q86Y01 620 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 MCEMP1Q8IX19 187 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 SLC25A45Q8N413 288 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 ADPRHL1Q8NDY3 354 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 PRR14LQ5THK1 2151 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 ABCA1O95477 2261 aa12.27□□□□□ -0.45
PCDH8-201ENST00000338862 SCGB1D1O95968 90 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 IFNA10P01566 189 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 FUT3P21217 361 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 PYY3Q5JQD4 70 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 FIP1L1Q6UN15 594 aaKnown RBP12.26□□□□□ -0.45
PCDH8-201ENST00000338862 WDR5BQ86VZ2 330 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 C1orf87Q8N0U7 546 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 LHX4Q969G2 390 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 NTNG2Q96CW9 530 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 SMIM7Q9BQ49 75 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 PLA2G3Q9NZ20 509 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 A0A0J9YW62 118 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 GAPDHP04406 335 aaKnown RBP12.26□□□□□ -0.45
PCDH8-201ENST00000338862 MSX1P28360 303 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 UBE2G2P60604 165 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 SRSF4Q08170 494 aaKnown RBP12.26□□□□□ -0.45
PCDH8-201ENST00000338862 RTL6Q6ICC9 239 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 LHFPL1Q86WI0 220 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 D2HGDHQ8N465 521 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 METTL1Q9UBP6 276 aaKnown RBP12.26□□□□□ -0.45
PCDH8-201ENST00000338862 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 RPS2P15880 293 aaKnown RBP12.26□□□□□ -0.45
PCDH8-201ENST00000338862 RAB1AP62820 205 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 CTAG1AP78358 180 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF600Q6ZNG1 722 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.26□□□□□ -0.45
PCDH8-201ENST00000338862 ABHD3Q8WU67 409 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 C12orf49Q9H741 205 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 ZDHHC8Q9ULC8 765 aa12.26□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF732B4DXR9 585 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 SIRPB1O00241 398 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 UBE2CO00762 179 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 PDCD6O75340 191 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 IGHV3-13P01766 116 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 IGHV3-7P01780 117 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 TGFBR3Q03167 851 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 CALHM1Q8IU99 346 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 Q96M66 194 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 SLC25A22Q9H936 323 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 TRAPPC2LQ9UL33 140 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 THADAQ6YHU6 1953 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 PLA2G5P39877 138 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF66Q6ZN08 573 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 LURAP1Q96LR2 239 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 HDGFL3Q9Y3E1 203 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 TMED3Q9Y3Q3 217 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 AQP7P3A6NL99 342 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 MRPL33O75394 65 aaKnown RBP12.25□□□□□ -0.45
PCDH8-201ENST00000338862 IGHMP01871 453 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 TRGC1P0CF51 173 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 BCL3P20749 454 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 ECI1P42126 302 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 SSR4P51571 173 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 HLA-DRB3P79483 266 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 FOXB1Q99853 325 aa12.25□□□□□ -0.45
PCDH8-201ENST00000338862 KRASP01116 189 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 IL13RA2Q14627 380 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 CCDC54Q8NEL0 328 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 OR4F5Q8NH21 305 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 PACRGQ96M98 296 aaPredicted RBP12.24□□□□□ -0.45
PCDH8-201ENST00000338862 OR4F4Q96R69 305 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 SMOC1Q9H4F8 434 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 FAM166BA8MTA8 275 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 PRF1P14222 555 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 ERVFRD-1P60508 538 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 CLN3Q13286 438 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 RHBDD2Q6NTF9 364 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 CCDC74BQ96LY2 380 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 HINT2Q9BX68 163 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 HEXAP06865 529 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 CHRNA7P36544 502 aa12.24□□□□□ -0.45
PCDH8-201ENST00000338862 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
PCDH8-201ENST00000338862 COL13A1Q5TAT6 717 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms