RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 OR13D1Q8NGV5 346 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 PLPPR1Q8TBJ4 325 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 PIFOQ8TCI5 191 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 MUL1Q969V5 352 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 SSX3Q99909 188 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 ING3Q9NXR8 418 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 TAS2R3Q9NYW6 316 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 ST3GAL6Q9Y274 331 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 MMP24Q9Y5R2 645 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 TRRAPQ9Y4A5 3859 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 H3BUX3 64 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 GEMIN2O14893 280 aaKnown RBP12.35□□□□□ -0.43
PRKN-201ENST00000338468 RGS10O43665 173 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 ARG1P05089 322 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 SERPINA2P20848 420 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 PAX5Q02548 391 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 MED22Q15528 200 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 C17orf58Q2M2W7 97 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 PAN3Q58A45 887 aaKnown RBP12.35□□□□□ -0.43
PRKN-201ENST00000338468 UTF1Q5T230 341 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 RSBN1Q5VWQ0 802 aaPredicted RBP12.35□□□□□ -0.43
PRKN-201ENST00000338468 TREML4Q6UXN2 200 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 CDH26Q8IXH8 852 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 JAGN1Q8N5M9 183 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 OR4D6Q8NGJ1 314 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 OR5R1Q8NH85 324 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 TMED9Q9BVK6 235 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 TMEM133Q9H2Q1 129 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 KIF25Q9UIL4 384 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 RAB26Q9ULW5 256 aa12.35□□□□□ -0.43
PRKN-201ENST00000338468 MRPS28Q9Y2Q9 187 aaKnown RBP12.35□□□□□ -0.43
PRKN-201ENST00000338468 FUOMA2VDF0 154 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 CRYBA1P05813 215 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 CDK2P24941 298 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 VHLP40337 213 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 MAP2K4P45985 399 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 LGALS4P56470 323 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 GPR50Q13585 617 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 TPBGQ13641 420 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 AANATQ16613 207 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 LRRC75BQ2VPJ9 315 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 LIPKQ5VXJ0 399 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 GLIPR1L1Q6UWM5 242 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 HEPN1Q6WQI6 88 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 GDPGP1Q6ZNW5 385 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 PRSS48Q7RTY5 328 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 SUMF2Q8NBJ7 301 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 OR4F5Q8NH21 305 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 DPCDQ9BVM2 203 aaPredicted RBP12.34□□□□□ -0.43
PRKN-201ENST00000338468 NCOR1P1Q9H4R4 102 aa12.34□□□□□ -0.43
PRKN-201ENST00000338468 TBL2Q9Y4P3 447 aaKnown RBP12.34□□□□□ -0.43
PRKN-201ENST00000338468 BTBD17A6NE02 478 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 VGLL3A8MV65 326 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
PRKN-201ENST00000338468 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
PRKN-201ENST00000338468 JUNBP17275 347 aaPredicted RBP12.33□□□□□ -0.44
PRKN-201ENST00000338468 MAPK3P27361 379 aaPredicted RBP12.33□□□□□ -0.44
PRKN-201ENST00000338468 DYNC1I2Q13409 638 aaKnown RBP12.33□□□□□ -0.44
PRKN-201ENST00000338468 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
PRKN-201ENST00000338468 TMEM91Q6ZNR0 172 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 Q6ZSV7 163 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 OR4P4Q8NGL7 312 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 THRSPQ92748 146 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 MALSU1Q96EH3 234 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 CYYR1Q96J86 154 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 CLEC7AQ9BXN2 247 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 GAL3ST2Q9H3Q3 398 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
PRKN-201ENST00000338468 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 KBTBD11-OT1A0A1B0GTJ5 212 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 ZNF729A6NN14 1252 aaPredicted RBP12.32□□□□□ -0.44
PRKN-201ENST00000338468 OR7C1O76099 320 aaPredicted RBP12.32□□□□□ -0.44
PRKN-201ENST00000338468 UCHL1P09936 223 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 CD37P11049 281 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 GTF2F2P13984 249 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 CD34P28906 385 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 KCNJ3P48549 501 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 RPS25P62851 125 aaKnown RBP12.32□□□□□ -0.44
PRKN-201ENST00000338468 SRSF4Q08170 494 aaKnown RBP12.32□□□□□ -0.44
PRKN-201ENST00000338468 SSX2Q16385 188 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 LY6EQ16553 131 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 PLA1AQ53H76 456 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 AWAT2Q6E213 333 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms