RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SHEQ5VZ18 495 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C20orf204Q6ZNR8 217 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 BTN2A1Q7KYR7 527 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ASCC1Q8N9N2 400 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZBTB8BQ8NAP8 495 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZNF286AQ9HBT8 521 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 Q9N2K0 584 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TMEM106BQ9NUM4 274 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ANXA10Q9UJ72 324 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 LAMP3Q9UQV4 416 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 HRNRQ86YZ3 2850 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MYO18BQ8IUG5 2567 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 IGHV1-69-2A0A0G2JMI3 117 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 INMT-MINDY4F8WBC2 141 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TMEM178BH3BS89 294 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SDCBPO00560 298 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 VAX1Q5SQQ9 334 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 IDO2Q6ZQW0 420 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C17orf107Q6ZR85 190 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DTX2Q86UW9 622 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ANGPTL6Q8NI99 470 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 GINS4Q9BRT9 223 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C20orf85Q9H1P6 137 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RIMS4Q9H426 269 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 EHFQ9NZC4 300 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SCP2D1Q9UJQ7 156 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZNF222Q9UK12 451 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OOEPA6NGQ2 149 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 NDUFB6O95139 128 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 H2AFB2P0C5Z0 115 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 GSTT2P0CG29 244 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OR3A1P47881 315 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RBMS2Q15434 407 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CCDC107Q8WV48 283 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PRRT1Q99946 306 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SHARPINQ9H0F6 387 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SEBOXQ9HB31 216 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 GYPAP02724 150 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MUC1P15941 1255 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TSPAN5P62079 268 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CBX3Q13185 183 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CDK10Q15131 360 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 STUMQ69YW2 141 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OVCH2Q7RTZ1 564 aa12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-201ENST00000338399 LRBAP50851 2863 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KIAA2026Q5HYC2 2103 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PPIAL4EA0A075B759 164 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 A0A0B4J293 547 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 FUOMA2VDF0 154 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PPIAL4DF5H284 164 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LYNX1G3V0Z9 82 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 H7C1Q1 480 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ARPC1BO15143 372 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF737O75373 536 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PPIAL4FP0DN26 164 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LYNX1P0DP58 116 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 RCC1P18754 421 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 COL8A2P25067 703 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 AESQ08117 197 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GRK1Q15835 563 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CARTPTQ16568 116 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SRSF7Q16629 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF880Q6PDB4 577 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNRF1Q8ND25 227 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR13C8Q8NGS7 320 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SLC2A8Q9NY64 477 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PPIAL4AQ9Y536 164 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MAB21L2Q9Y586 359 aa12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SPTAN1Q13813 2472 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-201ENST00000338399 UBR5O95071 2799 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 A1L4Q6 167 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LGALS8O00214 317 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GOSR1O95249 250 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CLDN1O95832 211 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 BCAP31P51572 246 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 HFEQ30201 348 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 Q6ZS49 121 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CADM3Q8N126 398 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GAPTQ8N292 157 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 COQ2Q96H96 371 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SNX22Q96L94 193 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 BEX1Q9HBH7 125 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CHD6Q8TD26 2715 aa12.32□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TRAV38-1A0A0B4J264 116 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms