RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CXCL13O43927 109 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 FKBP2P26885 142 aaKnown RBP14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 CARD18P57730 90 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 RSPO1Q2MKA7 263 aaPredicted RBP14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 LYSMD4Q5XG99 296 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 SPEM1Q8N4L4 309 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 TAAR9Q96RI9 348 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 GPHA2Q96T91 129 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 MAGT1Q9H0U3 335 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR51B6Q9H340 312 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 PLEKHA2Q9HB19 425 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 SLC2A9Q9NRM0 540 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 CELSR3Q9NYQ7 3312 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 CCDC187A0A096LP49 1063 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 SLC10A1Q14973 349 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 HIST3H3Q16695 136 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 ARSJQ5FYB0 599 aaPredicted RBP14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 P4HTMQ9NXG6 502 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 ANAPC10Q9UM13 185 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 TGOLN2O43493 480 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 OTX2P32243 289 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 DSCR4P56555 118 aaPredicted RBP14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 TMEM268Q5VZI3 342 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 OSR2Q8N2R0 312 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR52M1Q8NGK5 317 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR1F12Q8NHA8 337 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 DNASE2BQ8WZ79 361 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 LIME1Q9H400 295 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 PARP11Q9NR21 331 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 V9GYS6 101 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 CD5P06127 495 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 FCGR3AP08637 254 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 CCL4P13236 92 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 SRYQ05066 204 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 LGI3Q8N145 548 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 SPSB1Q96BD6 273 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 WFIKKN1Q96NZ8 548 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 TM2D1Q9BX74 207 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 SH3BGRL3Q9H299 93 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 UBE2ZQ9H832 354 aaPredicted RBP14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 HS3ST3B1Q9Y662 390 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 P04436 131 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 JMJD7P0C870 316 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 CEACAM16Q2WEN9 425 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 BTNL3Q6UXE8 466 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 HEPN1Q6WQI6 88 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 SLC25A26Q70HW3 274 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 TMEM217Q8N7C4 229 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR1J1Q8NGS3 322 aa14.32□□□□□ -0.12
CDC42EP4-201ENST00000335793 IGLV3-32A0A0A0MS00 114 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 ETV2O00321 342 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 HSPA12AO43301 675 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 DUSP1P28562 367 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 EPHA8P29322 1005 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 GNRHRP30968 328 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 TFPI2P48307 235 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 VAMP2P63027 116 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 SLC25A24Q6NUK1 477 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZNF695Q8IW36 515 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 FADS6Q8N9I5 356 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 RCL1Q9Y2P8 373 aaKnown RBP14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 WDFY3Q8IZQ1 3526 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 ONECUT2O95948 504 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 TRGC1P0CF51 173 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 LIFP15018 202 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 BTNL8Q6UX41 500 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 RHBDD1Q8TEB9 315 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 NABP1Q96AH0 204 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 CDX2Q99626 313 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 SRXN1Q9BYN0 137 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 COL4A2P08572 1712 aa14.31□□□□□ -0.12
CDC42EP4-201ENST00000335793 M0R143 59 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 LYL1P12980 280 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 HNF1AP20823 631 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 FGF7P21781 194 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 PCOLCEQ15113 449 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 HLA-BQ31612 363 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 DIRC2Q96SL1 478 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZNF407Q9C0G0 2248 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 FAM24AA6NFZ4 105 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 CBY3A6NI87 242 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZIC3O60481 467 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 TCN2P20062 427 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZNF468Q5VIY5 522 aaPredicted RBP14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 FAM27BQ5VT28 67 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 Q8WTZ3 238 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 ADAMTS9Q9P2N4 1935 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 IGKV1-27A0A075B6S5 117 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 IFNL4K9M1U5 179 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 CTSSP25774 331 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 TAGLN2P37802 199 aaKnown RBP14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 IL15RAQ13261 267 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 IFI44Q8TCB0 444 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 HIST1H2BLQ99880 126 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 C19orf12Q9NSK7 152 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 HSF4Q9ULV5 492 aa14.3□□□□□ -0.12
CDC42EP4-201ENST00000335793 GZMBP10144 247 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 AADACP22760 399 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 RAC1P63000 192 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms