RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 LRFN3Q9BTN0 628 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 FKBP11Q9NYL4 201 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 SLC25A10Q9UBX3 287 aaPredicted RBP13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ARPC4-TTLL3A0A0A6YYG9 625 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 CEACAM21Q3KPI0 293 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 DIRC2Q96SL1 478 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 PCGF1Q9BSM1 259 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 CA10Q9NS85 328 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 DVL1O14640 695 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 LANCL1O43813 399 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 DVL1P1P54792 670 aaPredicted RBP13.06□□□□□ -0.32
C9orf47-201ENST00000334490 OR2B8PP59922 312 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ZBTB37Q5TC79 503 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ACSM6Q6P461 480 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF485Q8NCK3 441 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 VSTM2AQ8TAG5 236 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 THYN1Q9P016 225 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF835Q9Y2P0 537 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 RAXQ9Y2V3 346 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 INSIG2Q9Y5U4 225 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 LHFPL6Q9Y693 200 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 IGLV3-12A0A075B6K2 115 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 C9orf170A2RU37 121 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 GZMKP49863 264 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 TNXAQ16473 311 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 OR4F5Q8NH21 305 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 OR4F4Q96R69 305 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 SEBOXQ9HB31 216 aaPredicted RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 RAB18Q9NP72 206 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 RNF115Q9Y4L5 304 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 THSD7BQ9C0I4 1608 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 A0A1W2PN81 502 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 MT-ND4LP03901 98 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 CHRNA7P36544 502 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 TAGLNQ01995 201 aaKnown RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 ROM1Q03395 351 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 EGR4Q05215 589 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 SPINK9Q5DT21 86 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 RELL2Q8NC24 303 aaPredicted RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 ASB13Q8WXK3 278 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 CCL13Q99616 98 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 UQCC1Q9NVA1 299 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 MRPL22Q9NWU5 206 aaKnown RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 PDCD11Q14690 1871 aaKnown RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 GGNBP1Q5YKI7 109 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF787Q6DD87 383 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 RAB40CQ96S21 281 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 RBM38Q9H0Z9 239 aaKnown RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 C1RLQ9NZP8 487 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 IGF2P01344 180 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
C9orf47-201ENST00000334490 TPRX1Q8N7U7 411 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 DYRK2Q92630 601 aa13.05□□□□□ -0.32
C9orf47-201ENST00000334490 PPYP01298 95 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 RRASP10301 218 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 BTN1A1Q13410 526 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 OR13D1Q8NGV5 346 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 NDFIP1Q9BT67 221 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 DIDO1Q9BTC0 2240 aaKnown RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 CRHP06850 196 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 SLC25A4P12235 298 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 UBE2G2P60604 165 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 CFHR1Q03591 330 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 ETV3LQ6ZN32 361 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 TBX6O95947 436 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 CTSDP07339 412 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 SCGB2A2Q13296 93 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 TIGITQ495A1 244 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF826PQ6ZT77 177 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 RPS4Y2Q8TD47 263 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 NEIL1Q96FI4 390 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 CCL28Q9NRJ3 127 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 DUS4LO95620 317 aaKnown RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 RAB4AP20338 218 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 HLA-DRB3P79483 266 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 COL10A1Q03692 680 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 RNF122Q9H9V4 155 aa13.04□□□□□ -0.32
C9orf47-201ENST00000334490 BARX1Q9HBU1 254 aaPredicted RBP13.04□□□□□ -0.32
C9orf47-201ENST00000334490 MDC1Q14676 2089 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF785A8K8V0 405 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 TEX30Q5JUR7 227 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 AVPI1Q5T686 147 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 PXDC1Q5TGL8 231 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 TBC1D26Q86UD7 250 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 FLVCR1-AS1Q8TAF5 88 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RAMP1O60894 148 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 GYPAP02724 150 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 CD37P11049 281 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms