RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 C9orf62Q8N4C0 152 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 STXBP6Q8NFX7 210 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 RAB1CQ92928 201 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 DNAJB12Q9NXW2 375 aaKnown RBP11.9□□□□□ -0.5
BRWD1-201ENST00000333229 SCN4AP35499 1836 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 TMEM30CPA0ZSE6 113 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 GHRHP01286 108 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 Q7L0L9 218 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 IL2RAP01589 272 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 HOXC13P31276 330 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 MFAP2P55001 183 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 INSM1Q01101 510 aaPredicted RBP11.9□□□□□ -0.5
BRWD1-201ENST00000333229 WBP2Q969T9 261 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 ZNF665Q9H7R5 613 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 RND1Q92730 232 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 WNT5BQ9H1J7 359 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 TRAV21A0A0B4J279 112 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 M0R082 166 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 MC5RP33032 325 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 TCF23Q7RTU1 214 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.5
BRWD1-201ENST00000333229 EMCNQ9ULC0 261 aa11.9□□□□□ -0.5
BRWD1-201ENST00000333229 LANCL1O43813 399 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 ZNF865P0CJ78 1059 aaPredicted RBP11.9□□□□□ -0.51
BRWD1-201ENST00000333229 B3GALT4O96024 378 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 TMEM255AQ5JRV8 349 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 TMEM65Q6PI78 240 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 RFLNAQ6ZTI6 216 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 Q8IYB0 196 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 SLC25A43Q8WUT9 341 aaPredicted RBP11.9□□□□□ -0.51
BRWD1-201ENST00000333229 OR8B2Q96RD0 313 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 CXorf36Q9H7Y0 433 aa11.9□□□□□ -0.51
BRWD1-201ENST00000333229 TRBV9A0A0B4J1U6 114 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 C3orf85A0A1B0GTC6 90 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 TMEM50AO95807 157 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 FAM157CP0CG43 387 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 ORM2P19652 201 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 GAGE2BQ13066 116 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 ZNF345Q14585 488 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 GAGE2EQ4V326 116 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 OR4S2Q8NH73 311 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 C8orf44Q96CB5 159 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 GAGE2DQ9UEU5 116 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 A0A1B0GUL6 1792 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 RBM45Q8IUH3 476 aaKnown RBP11.89□□□□□ -0.51
BRWD1-201ENST00000333229 TNFRSF14Q92956 283 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 HTN1P15515 57 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 CDK5R1Q15078 307 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 STARD10Q9Y365 291 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 FANCMQ8IYD8 2048 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 FURINP09958 794 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 ADAMTSL4Q6UY14 1074 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 OR2Z1Q8NG97 314 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 TRGC2P03986 189 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 MMP16P51512 607 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 LMO3Q8TAP4 145 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 WDFY2Q96P53 400 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 RAB1BQ9H0U4 201 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 GFRALQ6UXV0 394 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 PBOV1Q9GZY1 135 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 CMC2Q9NRP2 79 aa11.89□□□□□ -0.51
BRWD1-201ENST00000333229 POLR2AP24928 1970 aaKnown RBP11.89□□□□□ -0.51
BRWD1-201ENST00000333229 CKS2P33552 79 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 PSG5Q15238 335 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 DNASE2BQ8WZ79 361 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 RSPO3Q9BXY4 272 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 LIM2P55344 173 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 LGALSLQ3ZCW2 172 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 RTN4RL1Q86UN2 441 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 FAM174AQ8TBP5 190 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 ZNF764Q96H86 408 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 MYOFQ9NZM1 2061 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 APOBEC1P41238 236 aaKnown RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 MAP1LC3AQ9H492 121 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 COL1A1P02452 1464 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 B4GALT1P15291 398 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 SFTPA2Q8IWL1 248 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 SFTPA1Q8IWL2 248 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 GSN-AS1Q9NRJ2 163 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 PMELP40967 661 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 HDHD3Q9BSH5 251 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 EIF4E2O60573 245 aaKnown RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 YPEL5P62699 121 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 POLEQ07864 2286 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 A0A1W2PNR3 127 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 ZAR1LA6NP61 321 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 NPIPB8E9PQR5 432 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 NPIPB9F8W1W9 429 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 NPIPB7O75200 414 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 WNT1P04628 370 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 ZNF250P15622 560 aa11.88□□□□□ -0.51
BRWD1-201ENST00000333229 FCGR2BP31994 310 aaPredicted RBP11.88□□□□□ -0.51
BRWD1-201ENST00000333229 CLDN15P56746 228 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms